Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M13
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 200 9e-52
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 200 9e-52
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 200 9e-52
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 200 9e-52
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 200 9e-52
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 200 9e-52
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 142 3e-34
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 142 3e-34
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 31 0.92
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 4.9
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 28 6.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 200 bits (488), Expect = 9e-52
Identities = 95/150 (63%), Positives = 111/150 (74%)
Frame = -3
Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
HTQM +++ KK H+ I N GT E KV WAREH EK + VD+VFAQDEM D I
Sbjct: 165 HTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 224
Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KI
Sbjct: 225 GHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKI 284
Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
YRIG+ ++G KNN STE+DL++K+I
Sbjct: 285 YRIGKSALTEEG---KNNGSTEFDLTQKTI 311
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 200 bits (488), Expect = 9e-52
Identities = 95/150 (63%), Positives = 111/150 (74%)
Frame = -3
Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
HTQM +++ KK H+ I N GT E KV WAREH EK + VD+VFAQDEM D I
Sbjct: 165 HTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 224
Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KI
Sbjct: 225 GHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKI 284
Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
YRIG+ ++G KNN STE+DL++K+I
Sbjct: 285 YRIGKSALTEEG---KNNGSTEFDLTQKTI 311
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 200 bits (488), Expect = 9e-52
Identities = 95/150 (63%), Positives = 111/150 (74%)
Frame = -3
Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
HTQM +++ KK H+ I N GT E KV WAREH EK + VD+VFAQDEM D I
Sbjct: 67 HTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 126
Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KI
Sbjct: 127 GHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKI 186
Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
YRIG+ ++G KNN STE+DL++K+I
Sbjct: 187 YRIGKSALTEEG---KNNGSTEFDLTQKTI 213
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 114 KDRIRE 97
+D + E
Sbjct: 293 RDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 200 bits (488), Expect = 9e-52
Identities = 95/150 (63%), Positives = 111/150 (74%)
Frame = -3
Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
HTQM +++ KK H+ I N GT E KV WAREH EK + VD+VFAQDEM D I
Sbjct: 165 HTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 224
Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KI
Sbjct: 225 GHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKI 284
Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
YRIG+ ++G KNN STE+DL++K+I
Sbjct: 285 YRIGKSALTEEG---KNNGSTEFDLTQKTI 311
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 200 bits (488), Expect = 9e-52
Identities = 95/150 (63%), Positives = 111/150 (74%)
Frame = -3
Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
HTQM +++ KK H+ I N GT E KV WAREH EK + VD+VFAQDEM D I
Sbjct: 67 HTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 126
Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KI
Sbjct: 127 GHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKI 186
Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
YRIG+ ++G KNN STE+DL++K+I
Sbjct: 187 YRIGKSALTEEG---KNNGSTEFDLTQKTI 213
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 114 KDRIRE 97
+D + E
Sbjct: 293 RDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 200 bits (488), Expect = 9e-52
Identities = 95/150 (63%), Positives = 111/150 (74%)
Frame = -3
Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
HTQM +++ KK H+ I N GT E KV WAREH EK + VD+VFAQDEM D I
Sbjct: 165 HTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTR 224
Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KI
Sbjct: 225 GHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKI 284
Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
YRIG+ ++G KNN STE+DL++K+I
Sbjct: 285 YRIGKSALTEEG---KNNGSTEFDLTQKTI 311
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 142 bits (344), Expect = 3e-34
Identities = 68/105 (64%), Positives = 79/105 (75%)
Frame = -3
Query: 632 VFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 453
V A +M D I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 452 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+I
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTI 263
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 114 KDRIRE 97
+D + E
Sbjct: 343 RDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 142 bits (344), Expect = 3e-34
Identities = 68/105 (64%), Positives = 79/105 (75%)
Frame = -3
Query: 632 VFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 453
V A +M D I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 452 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+I
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTI 263
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 114 KDRIRE 97
+D + E
Sbjct: 343 RDFLAE 348
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +1
Query: 157 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCL--- 318
++T LG G+ +EF +D F C +RLSK++ LFR + + C
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
Query: 319 MDFSDRSY 342
+DFS++S+
Sbjct: 348 LDFSEKSF 355
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 560 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 399
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 288 NPXIITKSLFNGFLRQIILSRCIVFNNFAILFVDSLSNTIDFLVHFSTVMI 440
NP TKS+F GFL +IL + F +++ DS+++++ + + ++ +
Sbjct: 262 NPRDFTKSIFAGFLGVVILYLPLCIFAF-VVYGDSMTDSVIYSIQSPSLQL 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,068,598
Number of Sequences: 27780
Number of extensions: 325086
Number of successful extensions: 899
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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