BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M11 (805 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 109 3e-24 03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 109 3e-24 01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 33 0.27 12_02_1059 - 25744184-25745334,25745595-25746262,25747376-25747902 29 3.3 06_03_0543 + 21967787-21970261 29 5.7 12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423 28 7.6 04_04_0907 + 29304830-29305030,29305296-29305547 28 7.6 >07_03_1272 - 25360180-25360286,25360454-25360658,25360748-25360945, 25361034-25361296,25361865-25362009 Length = 305 Score = 109 bits (262), Expect = 3e-24 Identities = 47/79 (59%), Positives = 59/79 (74%) Frame = -1 Query: 595 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 416 P DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WLLAR VL++R Sbjct: 131 PRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMR 190 Query: 415 GVLPRDQRWDVVVDLFFYR 359 G + +WDV+VDLFFYR Sbjct: 191 GTILPGHKWDVMVDLFFYR 209 Score = 78.6 bits (185), Expect = 5e-15 Identities = 40/70 (57%), Positives = 47/70 (67%) Frame = -2 Query: 804 LVLAARAVVAIEXPADVXVISSRPFGQRAVLKFAAHTGATXIADVSXPGAFTNQIQAAFR 625 L LAAR +VAIE P D+ V S+RP+GQRAVLKFA +TGA IA PG FTNQ+Q +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121 Query: 624 EXSSLDCIGP 595 E L P Sbjct: 122 EPRLLILTDP 131 >03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701, 4319791-4320053,4320453-4320597 Length = 305 Score = 109 bits (262), Expect = 3e-24 Identities = 47/79 (59%), Positives = 60/79 (75%) Frame = -1 Query: 595 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 416 P DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++WLLAR VL++R Sbjct: 131 PRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMR 190 Query: 415 GVLPRDQRWDVVVDLFFYR 359 G + +WDV+VDLFFYR Sbjct: 191 GTILPGHKWDVMVDLFFYR 209 Score = 78.6 bits (185), Expect = 5e-15 Identities = 40/70 (57%), Positives = 47/70 (67%) Frame = -2 Query: 804 LVLAARAVVAIEXPADVXVISSRPFGQRAVLKFAAHTGATXIADVSXPGAFTNQIQAAFR 625 L LAAR +VAIE P D+ V S+RP+GQRAVLKFA +TGA IA PG FTNQ+Q +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121 Query: 624 EXSSLDCIGP 595 E L P Sbjct: 122 EPRLLILTDP 131 >01_06_0847 + 32411521-32411619,32411737-32411851,32412292-32412375, 32412430-32413478,32414690-32416371,32416477-32416586, 32417634-32418430,32418839-32418951,32419147-32419194, 32419425-32419652,32419732-32419829,32419967-32420019 Length = 1491 Score = 33.1 bits (72), Expect = 0.27 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%) Frame = -2 Query: 765 PAD--VXVISSRPFGQRAVLKFAAHTGATXIADVSXPGAFTNQIQAAFREXSSLDCIGPL 592 P+D + V+S PF Q+A+ ++ GAT + D G + + S DC+ Sbjct: 578 PSDRALPVVSGDPFQQKALQ--SSMFGATEVTDKMPKG--DKKRKRTKMSLKSTDCLSSK 633 Query: 591 HKTINPLLKLHMSTFL*LLCA 529 HK ++ +K H ST +LC+ Sbjct: 634 HKRLHLEMKAHDSTSNGILCS 654 >12_02_1059 - 25744184-25745334,25745595-25746262,25747376-25747902 Length = 781 Score = 29.5 bits (63), Expect = 3.3 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -2 Query: 207 TRCSSCFWSTPCSRRMVCPGTR*VEHN 127 T C C P + VCPG+R V+ N Sbjct: 275 TECKKCLAGAPAGIKQVCPGSRTVKAN 301 Score = 27.9 bits (59), Expect = 10.0 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 207 TRCSSCFWSTPCSRRMVCPGTR 142 TRC C P R CPG+R Sbjct: 81 TRCKECLARAPAGVRQECPGSR 102 >06_03_0543 + 21967787-21970261 Length = 824 Score = 28.7 bits (61), Expect = 5.7 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -1 Query: 457 LMWWLLAREVLRLRGVLPRDQRWDVVVDLF 368 L W++L RE +LRGV P + ++++ + F Sbjct: 472 LGWFILRREAKQLRGVWPAEAGYEMIANHF 501 >12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423 Length = 427 Score = 28.3 bits (60), Expect = 7.6 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -2 Query: 207 TRCSSCFWSTPCSRRMVCPGTR*VEHN 127 T+C C P VCPG+R V N Sbjct: 93 TQCKECLAGAPAGITQVCPGSRTVNAN 119 >04_04_0907 + 29304830-29305030,29305296-29305547 Length = 150 Score = 28.3 bits (60), Expect = 7.6 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -1 Query: 604 YWTPAQDHQPITE-ASYVNIPVIALCNTDSPLRFVDIAIPCNT 479 Y P D + E A+ NIP+I L + D P +IA C T Sbjct: 20 YARPESDRPRLAEVATDSNIPLIDLASPDKPRVIAEIAQACRT 62 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,594,332 Number of Sequences: 37544 Number of extensions: 373595 Number of successful extensions: 960 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 960 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2185924824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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