Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M09
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 260 1e-70
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 255 5e-69
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 102 7e-23
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 52 1e-07
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 32 0.11
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 31 0.15
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.4
SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 2.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.5
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 26 7.3
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 260 bits (638), Expect = 1e-70
Identities = 131/209 (62%), Positives = 151/209 (72%), Gaps = 4/209 (1%)
Frame = -2
Query: 746 SSITASLRFXGALNVDLTRVPD*LGALPPYPLPTGHVRASHLCREGLP*TAFRRPRSQTH 567
SSITASLRF G+LNVDL L P P V S + AF S
Sbjct: 240 SSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPL--VTYSPIVSAA---KAFHESNSVQE 294
Query: 566 ASS----PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 399
++ P + PR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTG
Sbjct: 295 ITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTG 354
Query: 398 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 219
FK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVG
Sbjct: 355 FKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVG 414
Query: 218 EGMEEGEFSEAREDLAALEKDYEEVGMDS 132
EGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 415 EGMEEGEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 255 bits (625), Expect = 5e-69
Identities = 131/209 (62%), Positives = 152/209 (72%), Gaps = 4/209 (1%)
Frame = -2
Query: 746 SSITASLRFXGALNVDLTRVPD*LGALPP--YPLPTGH--VRASHLCREGLP*TAFRRPR 579
SSITASLRF G+LNVDL L P +PL T V A+ E + +
Sbjct: 236 SSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHES---NSVQEIT 292
Query: 578 SQTHASSPPTRW*NAXPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 399
+Q P + PR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTG
Sbjct: 293 NQCF--EPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTG 350
Query: 398 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 219
FK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVG
Sbjct: 351 FKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVG 410
Query: 218 EGMEEGEFSEAREDLAALEKDYEEVGMDS 132
EGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 411 EGMEEGEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 102 bits (244), Expect = 7e-23
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Frame = -2
Query: 746 SSITASLRFXGALNVDLTRVPD*LGALPPYPLPTGH---VRASHLCREGLP*-TAFRRPR 579
+ +T S RF G LN DL ++ A+ P P H V + L G A P
Sbjct: 234 AGVTTSFRFPGELNSDLRKL-----AVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPE 288
Query: 578 SQTHASSPPTRW*NAXPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 399
A PRHG+Y+ L+RG V K+V+ I +++TK + FV+W P
Sbjct: 289 LTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDN 348
Query: 398 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 219
+ PP DL + + + N+T+I E + RL +F M+ ++AF+HWY G
Sbjct: 349 VLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTG 400
Query: 218 EGMEEGEFSEAR---EDLAALEKDYEEVGMD 135
EGM+E EF+EA DL + + Y+E G+D
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 33.1 bits (72), Expect = 0.048
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 679 NLVPYPRIHFPLVTYAPVISAEKAYHEQLSVXRDHKRMLRA 557
N+VP+PR+HF +V +AP+ + + + +SV ++M A
Sbjct: 256 NMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDA 296
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 52.0 bits (119), Expect = 1e-07
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = -2
Query: 497 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 318
+ +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ + M
Sbjct: 323 IIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----M 377
Query: 317 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 150
L+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L +YE
Sbjct: 378 LANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 679 NLVPYPRIHFPLVTYAP 629
+L+P PR HF L +Y P
Sbjct: 259 SLIPSPRCHFLLTSYTP 275
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.9 bits (69), Expect = 0.11
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = -3
Query: 553 QPDGEMRXPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
QP P + S VV P + RP++P P LS V PV+ V +
Sbjct: 531 QPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVP 590
Query: 373 HPPWCP 356
PP P
Sbjct: 591 QPPVAP 596
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 473 WVRRHHGTAYSKPCTCHDGGSHFTIWLAGSKHAFVISXDGKLFMVGLLGRDDWRVR 640
W R H Y+KPC DGG W G S +G L+ + + +++ R
Sbjct: 16 WRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTR 71
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 286 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 113
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 112 EPKSTK 95
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 241
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 729 FEIRRRSECGPHPSSRLTWCLTPVSTSHWSRTRQSSLPRRP 607
FE R C + SRL P + W+R ++ +P P
Sbjct: 171 FEKRLHCSCSEYEESRLRKTFKPFHLTCWNRDDKTDMPSSP 211
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 454 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 368
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 676 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVXRDHKRMLRARQPDGEMRXPV-MASTW 509
L + ++ + Y+P+ + AY+ +S +HK ++ GE P +A +W
Sbjct: 201 LEKHKKLQIHVSAYSPLANQNDAYNSDISKLIEHKTLVDIANARGEGITPANIAISW 257
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 457 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 362
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,106,516
Number of Sequences: 5004
Number of extensions: 66749
Number of successful extensions: 238
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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