Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M08
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 719 YRP-PTVHAYRPFASMGRSCYDILGKSR*FWCXTTPLTSMGWRL 847
           YRP  TV+ +RP+  +  +   ILG     W      TS+  RL
Sbjct: 525 YRPWQTVYNHRPWQQLHLNKKQILGGEACLWSEQFDETSLDTRL 568


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 756 RQWGGVVTTFWESPVDFGAKQLH 824
           ++WG    TF E P  FG  + H
Sbjct: 103 KEWGTTALTFEEDPEPFGGVRDH 125


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 701 LNELCLYRPPTVHAYRPFASMGRSCYDIL 787
           LNEL     PT   Y P  +M  SC +IL
Sbjct: 368 LNELDRREDPTNDEYLPGCAMVDSCSNIL 396


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 419 KHNMSTNLSVIKNPRQHN 472
           +HN+S N   +K PR ++
Sbjct: 132 RHNLSLNKCFVKVPRHYD 149


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 146 GHSRSEMSASRRRLSAPNAYDSPP 217
           GH+ + + AS+  L +P++  +PP
Sbjct: 258 GHAFTLVDASQHDLGSPSSGPAPP 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,785
Number of Sequences: 336
Number of extensions: 4210
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)