Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M06
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 29 0.58
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.4
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 2.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.4
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 27 3.1
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 4.1
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 27 4.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 4.1
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 5.5
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.5
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.2
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 26 7.2
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 25 9.5
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.5
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.5
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 764 PPLHXLALXXXVFALMHQATLPCDXGYINPIIKSPIPYTNHP 639
P + L VF + HQA L C GY + + +P+ N P
Sbjct: 334 PIIMELERQGDVFIICHQAILRCIYGYYHNLSLEELPFINVP 375
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 103 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 231
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -2
Query: 532 PSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHRL*S 353
PS+L + + N E SR I+ HST +S + HRR+ S+HR S
Sbjct: 94 PSALALTSSKAANRSSTNTEKD-SRSIA-HSTSRSRSTSPANRHRRKEKERTRSNHRHGS 151
Query: 352 QNRRQ 338
R +
Sbjct: 152 HRRHE 156
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 2.4
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = -2
Query: 655 HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVND 476
++ T+ L S S+N T A LSS A S T SSL + S +
Sbjct: 188 NSATSSSLASSSLNSTTS-----ATATSSSLSSTAASNSATSSSLASSSLNST----TSA 238
Query: 475 ESQASRLISRHSTHTPLPSSNSPT 404
+ +S + S S+ TPL SSNS T
Sbjct: 239 TATSSSISSTVSSSTPLTSSNSTT 262
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 258 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 163
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -3
Query: 357 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 178
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 177 LSASIQASLPSSEIYRQL 124
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 475 ESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPS 371
E+ ASRL+ H T L + P H + H +P+
Sbjct: 77 EALASRLLKGHMTQLSLRTILPPAHTKNLHRQQPT 111
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.6 bits (56), Expect = 4.1
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -2
Query: 658 FHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQV 482
FHTPT P T +S +P + + PLS +A S LT S L + SPP V
Sbjct: 139 FHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTSSPLKDFQS-SPPLSTV 195
Query: 481 NDESQASRLISRHSTHTPLPSSNSPTH 401
+S HS H L +N H
Sbjct: 196 LQKS--------HSLHDILLDTNDDDH 214
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 469 QASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHR 362
+ +L +R STH ++ T+ RRH H S HR
Sbjct: 2 EKEKLTNRTSTH-KFNETDRETNHSRRHRHHHSRHR 36
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = -2
Query: 646 TTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQ 467
+TP +S +N TP A PP++S TP + S P +
Sbjct: 1629 STPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNS 1688
Query: 466 ASRLISRHSTHTPLPSSNS 410
++ + S + +T P ++S
Sbjct: 1689 STPITSSTALNTSTPITSS 1707
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -2
Query: 622 SINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRH 443
S+NP TP +P + PP+S+ +P P S ++P + +N+ S+ S
Sbjct: 271 SLNPSTPSPFGGSPVMHPPVSNLSPRTPAVPMS--SDGHLAPAFDFLNENPIWSKRFSIS 328
Query: 442 STHTPLPSSNSPTH 401
S PS+++ ++
Sbjct: 329 SIKYSAPSTSNASN 342
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 468 KLRALLVVIPRILRSPPPTHPLIEDV 391
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 145 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 47
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Frame = -2
Query: 508 GVSPPYFQVNDESQASRLISRHSTHTPLPSSNSP-----THRRRRHGHKPSHHR 362
GV PP ++ + S PLPS P ++ KP HH+
Sbjct: 129 GVPPPGMPYREKEELSSETDESVIDIPLPSEEYPFEDPKPREKKNKSFKPKHHK 182
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 400 DEWVSWRRGAEYAWN 444
D W W R EY+WN
Sbjct: 334 DSWKRWCRVKEYSWN 348
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 333 LVTHKELALKVSSIIGTRVYVFDPSCY 253
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 118 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 219
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,075,930
Number of Sequences: 5004
Number of extensions: 63829
Number of successful extensions: 225
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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