BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M06 (803 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_03_0088 + 12327339-12328092,12329474-12329601,12330249-123304... 33 0.20 05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.81 12_01_0302 - 2286171-2286341,2286747-2286968 29 4.3 10_05_0065 + 8736744-8738879 29 5.7 09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.7 06_02_0240 + 13397512-13397856 29 5.7 02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.7 12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 7.6 11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 28 7.6 02_02_0671 - 12811102-12811608 28 7.6 01_01_1237 - 10047417-10047934,10048899-10049136 28 7.6 08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 28 10.0 08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 10.0 02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 10.0 01_05_0014 - 17162664-17163500 28 10.0 >01_03_0088 + 12327339-12328092,12329474-12329601,12330249-12330474, 12332638-12332765,12332880-12333033,12333408-12333841 Length = 607 Score = 33.5 bits (73), Expect = 0.20 Identities = 22/56 (39%), Positives = 26/56 (46%) Frame = -2 Query: 505 VSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHRL*SQNRRQ 338 +SPP Q S+A R S PLP+ P HRR PS RL S RR+ Sbjct: 1 MSPPPPQRPSPSRAGRANLFSSPPPPLPNCYDPKHRRPAPPPLPSARRLPSNRRRR 56 >05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613, 2879715-2879973,2880060-2880346,2880423-2880758, 2880862-2881003,2881077-2881297,2881379-2881540, 2881617-2881775,2881860-2882159,2882834-2883097, 2883133-2883243,2883902-2883988 Length = 1871 Score = 31.5 bits (68), Expect = 0.81 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Frame = -2 Query: 655 HTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSA-YLTPSSLGMAKGVSPPYFQ 485 ++PT+P TS + +P +P +PG P S +PS+ PSS+ + Sbjct: 1766 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1825 Query: 484 VNDESQASRLISRHSTHTPLPS-SNSPTHRRRRHGHK 377 N S S S S PS S SPT R H+ Sbjct: 1826 PNYYSSTSPTYSPTSPSYSQPSPSYSPTSRVEEEAHE 1862 >12_01_0302 - 2286171-2286341,2286747-2286968 Length = 130 Score = 29.1 bits (62), Expect = 4.3 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 84 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 185 RL+R RK + D+ G + +GEKLE + +E+ Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90 >10_05_0065 + 8736744-8738879 Length = 711 Score = 28.7 bits (61), Expect = 5.7 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 Query: 394 VFDEWVSWRRGAEYAW 441 VFD W SWR GA+ AW Sbjct: 181 VFDRWTSWRPGAD-AW 195 >09_04_0737 - 19822822-19822973,19823069-19823135,19823666-19823822, 19824003-19824177,19824364-19824481,19824676-19824874, 19824983-19825062,19825141-19825257,19825791-19825961, 19826121-19826597 Length = 570 Score = 28.7 bits (61), Expect = 5.7 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 76 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 222 F+VD G G + ++++LAV+ G R CR VV DVVV Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140 >06_02_0240 + 13397512-13397856 Length = 114 Score = 28.7 bits (61), Expect = 5.7 Identities = 19/58 (32%), Positives = 23/58 (39%) Frame = -2 Query: 535 TPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHR 362 TPS LGM V E A+R + P P +H RRR G +P R Sbjct: 53 TPSLLGMLTQVKCLVVVETQEMYAARRQAEEDRRAPRPPL-IVSHTRRRRGERPPQRR 109 >02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868, 30560292-30560346,30560537-30560613,30561228-30561315, 30561490-30561593,30562050-30562231,30562347-30563109, 30563195-30563438,30564513-30564658,30565158-30565283, 30565404-30565517,30565595-30565762,30566283-30566528, 30566605-30566767,30566970-30567064,30567274-30567357, 30567769-30568055,30568359-30568572,30568923-30569140, 30569386-30569623,30570312-30571118,30571202-30571301, 30571694-30571737,30571824-30571973 Length = 1942 Score = 28.7 bits (61), Expect = 5.7 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -3 Query: 243 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 64 P F T+LY ++KD S+ L S+ Y L+DP S D+ + + Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407 Query: 63 ILHSF 49 +LHSF Sbjct: 1408 LLHSF 1412 >12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915, 7694019-7694142,7696084-7696189,7696346-7696532 Length = 1184 Score = 28.3 bits (60), Expect = 7.6 Identities = 23/70 (32%), Positives = 31/70 (44%) Frame = -2 Query: 571 PPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRR 392 PP + + P+ PS+ AK ++PP R S ST TP S SP RR Sbjct: 177 PPFALQPPTPSWRPSTPPSAKTLTPP----------RRSPSPASTLTPPRRSPSPASRRM 226 Query: 391 RHGHKPSHHR 362 G P+ +R Sbjct: 227 STGSTPALNR 236 >11_06_0578 + 25176304-25176388,25176503-25177032,25177267-25177997, 25178122-25178172,25178562-25178813,25178894-25179004, 25179102-25179183,25179460-25179489 Length = 623 Score = 28.3 bits (60), Expect = 7.6 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = -2 Query: 571 PPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRR 392 PP S+ P+ L A SPP S S L S ST+TP+ S + H RR Sbjct: 395 PPSPSQQPT--LPAPQPVQASPTSPPK---QHASPGSALSSSLSTYTPICSGRTSAHTRR 449 Query: 391 RHGHKPSHHRL*SQNRRQ*FSNS*GTG 311 + + S ++ F + TG Sbjct: 450 NSEKRKELAHVMSDSQNMQFHEADRTG 476 >02_02_0671 - 12811102-12811608 Length = 168 Score = 28.3 bits (60), Expect = 7.6 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = -2 Query: 562 SSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPT 404 ++ A + YL+PS + G S + +V +R ++ +TH+PLP SPT Sbjct: 86 TATAKAFYLSPSPPLLPFGASHSFAKVCTIEAKAR--NKPATHSPLPKPYSPT 136 >01_01_1237 - 10047417-10047934,10048899-10049136 Length = 251 Score = 28.3 bits (60), Expect = 7.6 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -2 Query: 583 PGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPL-PSSNSP 407 P L+PP ++EAP PSS A +PP F + S + ST PL + ++P Sbjct: 168 PDLRPP-AAEAPG----PSSSAGAAADAPPTFDFSHPKNVSNSPADTSTTAPLDDADDAP 222 Query: 406 T 404 T Sbjct: 223 T 223 >08_02_1418 - 26931896-26932339,26932435-26932668,26932805-26933110, 26933462-26933644,26934386-26934493 Length = 424 Score = 27.9 bits (59), Expect = 10.0 Identities = 18/55 (32%), Positives = 22/55 (40%) Frame = -2 Query: 532 PSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSH 368 PSSLGM + +SPP V+ E R L S R G +P H Sbjct: 329 PSSLGMGRALSPPKMSVDLEMGMKRQTVAMEELEDLHSQIGSAMGLERCGTEPPH 383 >08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969, 3220080-3223195,3223303-3223561,3223665-3223951, 3224029-3224364,3224463-3224604,3224690-3224910, 3224990-3225151,3225242-3225400,3225488-3225787, 3226306-3226569,3227370-3227453 Length = 1855 Score = 27.9 bits (59), Expect = 10.0 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = -2 Query: 655 HTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQV 482 ++PT+P TS S +P +P +P P + +PS +PSS ++ PY Q Sbjct: 1718 YSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLS-----PYSQT 1772 Query: 481 N-DESQASRLISRHSTHTPLPS-SNSPT 404 + + S S S S PS S SPT Sbjct: 1773 SPNYSPTSPTYSPTSPSYSQPSPSYSPT 1800 >02_02_0718 - 13290764-13290897,13292375-13293041,13293364-13293719, 13294559-13294629,13295326-13295336 Length = 412 Score = 27.9 bits (59), Expect = 10.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 444 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 355 +P++L+SPP T+ IED + + ID K Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411 >01_05_0014 - 17162664-17163500 Length = 278 Score = 27.9 bits (59), Expect = 10.0 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -2 Query: 577 LKPPLSSEAPSAYLTPSSLGMAKGVSPP---YFQVNDESQASRLISRHSTHTPLPSS 416 +K + ++P+ TP LG+ K PP Y ++ +++T T PS+ Sbjct: 87 IKTKIRGDSPARQPTPGELGLLKAAPPPAERYVGTLFTKAGDEVLHKYTTPTATPST 143 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,375,721 Number of Sequences: 37544 Number of extensions: 478491 Number of successful extensions: 1547 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1540 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2185924824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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