Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M06
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006795-7|AAF59497.2|  199|Caenorhabditis elegans Hypothetical ...    30   1.7  
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AF025460-2|AAF02169.3|  545|Caenorhabditis elegans Prion-like-(q...    30   2.2  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    29   5.1  
Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical p...    29   5.1  
Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical ...    28   6.8  
AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z81547-4|CAB04458.1|  368|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.0  

>AC006795-7|AAF59497.2|  199|Caenorhabditis elegans Hypothetical
           protein Y50D4B.1 protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 460 RLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHRL 359
           R ++R   H P+P+   P    R+  H P H +L
Sbjct: 158 RCLTRFPVHYPVPAKRIPMEINRQKNHHPPHRKL 191


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = -2

Query: 607 TPY*KEFAPGLKPPL--SSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTH 434
           TP     A  L PP+  SS  P    TP         S PY Q+N+    +R  +R    
Sbjct: 478 TPSAVSTASELSPPIPMSSPPPPLPRTPQPNNGLPNASLPYNQINNAGSFTRTAARRWKF 537

Query: 433 TPLPSSNSP 407
           T + + +SP
Sbjct: 538 TSVEARSSP 546


>AF025460-2|AAF02169.3|  545|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 41
           protein.
          Length = 545

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = -2

Query: 562 SSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHRRRRHG 383
           SS A S+  TPSS    K  SPP+ Q +    A       +   P P+S++P     R G
Sbjct: 51  SSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVTSAHAPPPPASSAPIVGAPRQG 110

Query: 382 HKP 374
             P
Sbjct: 111 ATP 113


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 723 PYASSHPPLRXRXHQPDHQIPDS 655
           P +S HPPL    H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 475 ESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHRL 359
           + +A R  SRHS   P P  +S  +RRR+     + +RL
Sbjct: 370 DREADRTSSRHSHRNPEPDESSIRYRRRQQLEDEAWNRL 408


>Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 475 ESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHRL 359
           + +A R  SRHS   P P  +S  +RRR+     + +RL
Sbjct: 370 DREADRTSSRHSHRNPEPDESSIRYRRRQQLEDEAWNRL 408


>AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2b protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = -2

Query: 532 PSSLGMAKGVSPPYFQVNDESQASRLISRHS----THTPLPSSNSPTHRRRRHGHKPSH- 368
           PS+ G+      P    ND +Q +  +SR +    +H P P+ +   HR + +    SH 
Sbjct: 187 PSTDGIRSFQQSPTSSYNDSAQPNYELSRTTYSPASHRPTPTKDYSDHREKPYNTATSHQ 246

Query: 367 --HRL*SQNR 344
              RL S++R
Sbjct: 247 SSERLNSESR 256


>AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2a protein.
          Length = 772

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = -2

Query: 532 PSSLGMAKGVSPPYFQVNDESQASRLISRHS----THTPLPSSNSPTHRRRRHGHKPSH- 368
           PS+ G+      P    ND +Q +  +SR +    +H P P+ +   HR + +    SH 
Sbjct: 187 PSTDGIRSFQQSPTSSYNDSAQPNYELSRTTYSPASHRPTPTKDYSDHREKPYNTATSHQ 246

Query: 367 --HRL*SQNR 344
              RL S++R
Sbjct: 247 SSERLNSESR 256


>Z81547-4|CAB04458.1|  368|Caenorhabditis elegans Hypothetical
           protein F53F8.5 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 466 ASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSHHR 362
           + RL S      P  S+ S + R   H H+P HHR
Sbjct: 308 SGRLSSTVQRAPPRASAPSSSSRSAHHHHQPRHHR 342


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 18/74 (24%), Positives = 32/74 (43%)
 Frame = -2

Query: 583 PGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPT 404
           P   P +  EA +      + G    +  P +  N   + S  ++  S+   + S +  T
Sbjct: 275 PDRPPSVLLEAVTLKCEIDTSGPILELPRPTYTKNMSRRFSDAVNSISSRGRMKSVSFGT 334

Query: 403 HRRRRHGHKPSHHR 362
            R+RRH H+P  +R
Sbjct: 335 SRKRRHSHQPQGNR 348


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 568  PLSSEAPSAYLTPSSLGMAKGVSPP 494
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 568  PLSSEAPSAYLTPSSLGMAKGVSPP 494
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,008,678
Number of Sequences: 27780
Number of extensions: 360069
Number of successful extensions: 1259
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)