Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M06
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 36 0.042
At3g47170.1 68416.m05122 transferase family protein low similari... 35 0.073
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 33 0.17
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 31 0.90
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 30 1.6
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.6
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.6
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 29 2.7
At2g42460.1 68415.m05253 meprin and TRAF homology domain-contain... 29 2.7
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 29 2.7
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 29 3.6
At1g48290.1 68414.m05394 expressed protein ; expression supporte... 29 3.6
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 29 3.6
At5g22940.1 68418.m02682 exostosin family protein contains Pfam ... 29 4.8
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 28 6.3
At3g52520.1 68416.m05775 expressed protein 28 8.3
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 8.3
At1g61840.1 68414.m06978 DC1 domain-containing protein similar t... 28 8.3
At1g50620.1 68414.m05688 PHD finger family protein contains Pfam... 28 8.3
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 35.5 bits (78), Expect = 0.042
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = -2
Query: 649 PTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDES 470
P +P ++ +++P P AP PP + P A P+S A PP
Sbjct: 101 PQSPPASAPTVSP-PPVSPPPAPTSPPPTPASPPPA---PASPPPAPASPPPAPVSPPPV 156
Query: 469 QASRLISRHSTHTPLPSSNSPTHRRRRHGHKPS 371
QA IS P P+ + H+ +RH H P+
Sbjct: 157 QAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPA 189
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -3
Query: 474 NHKLRALLVVIPRILRSPP-PTHPLIEDVVMATNQAIIDYK-VKIADNNLVTHKELALKV 301
N K LV + + SP PT ++ +++ T++ I K + I D NL KE +K+
Sbjct: 222 NDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKI 281
Query: 300 SSIIGTRVYVFDPSC 256
+++ YV+ C
Sbjct: 282 TTVEVLAAYVWRARC 296
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -2
Query: 658 FHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPY 491
+ +P TP S S P ++AP KP + S P Y TPS K PPY
Sbjct: 25 YSSPQTPSYNSPSYEHKGP---KYAPHPKPYVKSSPPPQYYTPSPKVNYKSPPPPY 77
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -2
Query: 658 FHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPY 491
+ +P TP S S P ++AP KP + S P Y TPS K PPY
Sbjct: 31 YSSPHTPAYDSPSYEHKGP---KYAPHPKPYVYSSPPPPYYTPSPKVNYKSPPPPY 83
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = -2
Query: 577 LKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHR 398
++ P S PS Y S + P F S+ HS P PS P+H+
Sbjct: 454 MRRPKSPITPSGYNRSPSTHIGHNYRSPKFNSGGHYPGSQSSRHHSG--PSPSRWQPSHQ 511
Query: 397 RRRHGHKPSHH 365
H H+ HH
Sbjct: 512 HHHH-HQHLHH 521
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -2
Query: 577 LKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHR 398
L PP S TP S SPPY D S ++ +HTP PS+ S T
Sbjct: 38 LSPPSGSHGTPPSHTPPSSNCG---SPPY----DPSPSTPSHPSPPSHTPTPSTPSHTPT 90
Query: 397 RRRHGHKPSHH 365
H P+ H
Sbjct: 91 PHTPSHTPTPH 101
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -2
Query: 577 LKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPTHR 398
L PP S TP S SPPY D S ++ +HTP PS+ S T
Sbjct: 38 LSPPSGSHGTPPSHTPPSSNCG---SPPY----DPSPSTPSHPSPPSHTPTPSTPSHTPT 90
Query: 397 RRRHGHKPSHH 365
H P+ H
Sbjct: 91 PHTPSHTPTPH 101
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -2
Query: 649 PTTPDLTSI-SINPLTPY*KEFAPGLKPPLSSEAPSAYLTP-SSLGMAKGVSPPYFQVND 476
P+ P + + S++P P K +P + P + APS P SS+ A+ +
Sbjct: 134 PSAPAHSPVPSVSPTQPP-KSHSP-VSPVAPASAPSKSQPPRSSVSPAQPPKSSSPISHT 191
Query: 475 ESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPSH 368
+ + + HS TP PS SP+ H P+H
Sbjct: 192 PALSPSHATSHSPATPSPSPKSPSPVSHSPSHSPAH 227
>At2g42460.1 68415.m05253 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 441
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 447 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKEL 313
V P++L PL E+ + N+ II +VK+A+ +T KE+
Sbjct: 273 VEPKMLSFKDYASPLQEEGFLENNKLIIRVEVKVAEEGYLTGKEM 317
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -2
Query: 637 DLTSISI-NPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVND--ESQ 467
DL SI++ P TP P PP S+ + ++ P P+ Q + Q
Sbjct: 434 DLLSITLCTPSTPPAPSSQPSPPPPAGSDQ-NTHIYPQPQPRFDSYVAPWAQQQQPQQPQ 492
Query: 466 ASRLISRHSTHTPLPSSNSPTHRRRRHGH 380
A + S+H H + P H +++ G+
Sbjct: 493 AQQGYSQHQQHQQQQGYSQPQHSQQQQGY 521
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 294 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRQLVD 118
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 276 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLV 121
+V S Y+ T PF T + N+R +K+N+ + A PS I Q +
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRI 61
>At1g48290.1 68414.m05394 expressed protein ; expression supported
by MPSS
Length = 444
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 577 LKPPLSS-EAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHSTHTPLPS-SNSPT 404
++PP +S E PSA + P S+ + PP V + +AS + + H P S+S
Sbjct: 24 VEPPSASIEPPSASIEPPSVA----IEPP--SVAELRRAS--VEAPAIHEPSTRPSHSVV 75
Query: 403 HRRRRHGHKPSHHRL*SQNRRQ 338
RRR K + +RL NRR+
Sbjct: 76 DNRRRKKSKQNGNRLDGDNRRK 97
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 445 HSTHTP-LPSSNSPTHRRRRHGHKPSHH 365
H T TP L + +P H H H P HH
Sbjct: 29 HKTQTPSLAPAPAPYHHGHHHPHPPHHH 56
>At5g22940.1 68418.m02682 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 469
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -2
Query: 493 YFQVNDESQAS--RLISRHSTHTPLPS 419
YF V D+S S RL+S H T + LPS
Sbjct: 63 YFSVEDQSSPSSIRLLSNHKTSSSLPS 89
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Frame = -2
Query: 655 HTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS--LGMAKGVSP--P 494
++PT+P TS S +P +P +P P + +PS +PS+ L A SP P
Sbjct: 1699 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 1758
Query: 493 YFQVNDESQASRLISRHSTHTPLPSSNSPTHRRRRHGHKPS 371
+ S + S +S +P S +SP + PS
Sbjct: 1759 NYSPTSPSYSPTSPS-YSPSSPTYSPSSPYSSGASPDYSPS 1798
>At3g52520.1 68416.m05775 expressed protein
Length = 133
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/84 (28%), Positives = 33/84 (39%)
Frame = -2
Query: 643 TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQA 464
T DL +S+N + LK L S + + S +A VS P + +
Sbjct: 22 TLDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVK 81
Query: 463 SRLISRHSTHTPLPSSNSPTHRRR 392
S TP PSSN P+ RR
Sbjct: 82 QAACSYLQPSTPTPSSN-PSFLRR 104
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = -2
Query: 649 PTTPDLTSISINPLTPY*KEFAP-----GLKPPLSSEAPSAYLTPS 527
P +P S S P +P P L PPL +PSA +TPS
Sbjct: 44 PPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPS 89
>At1g61840.1 68414.m06978 DC1 domain-containing protein similar to
hypothetical protein GI:3184279 from [Arabidopsis
thaliana]; contains Pfam profile PF03107: DC1 domain
Length = 814
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 478 DESQASRLISRHSTHTPLPSSNSPTHRRRRHGH 380
D+ +L+ H +TP+P + SPT + H
Sbjct: 13 DDKLYQQLVYYHPKYTPIPQTKSPTSSHKTASH 45
>At1g50620.1 68414.m05688 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 629
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 759 PSSSRIXXGXFRPYASSHPP 700
PSSSRI FRP+ S PP
Sbjct: 247 PSSSRISDPSFRPFMSQTPP 266
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,563,245
Number of Sequences: 28952
Number of extensions: 363322
Number of successful extensions: 1325
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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