Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M02
(779 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 335 6e-91
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 320 3e-86
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 269 6e-71
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 252 1e-65
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 191 1e-47
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 184 2e-45
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 182 1e-44
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 132 7e-30
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 113 4e-24
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 104 2e-21
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 99 6e-20
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 97 3e-19
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 97 6e-19
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 96 1e-18
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 93 7e-18
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 87 6e-16
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 85 1e-15
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 85 2e-15
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 83 6e-15
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 82 1e-14
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 80 5e-14
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 75 2e-12
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 73 6e-12
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 72 1e-11
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 61 3e-08
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-... 36 1.5
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q9P0F5 Cluster: HSPC081; n=1; Homo sapiens|Rep: HSPC081... 35 2.0
UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 33 8.0
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 335 bits (824), Expect = 6e-91
Identities = 156/226 (69%), Positives = 182/226 (80%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
QKKAH+ME GGT+ + + + + +PV+ VF QDEMID I TSR
Sbjct: 175 QKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSR 234
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
WHTKKLPRKTH+GLRKVACIGAWHP+RV+F+VARAGQKGYHHRTE+NKKIY+IGQG K
Sbjct: 235 WHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK 294
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
DGK+IKNNAST+YDLS+KSI P+GGF HYGEV NDFVM+KGC +G KKR++TLRKSL V
Sbjct: 295 DGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQ 354
Query: 228 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 91
TKR ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKDRI +E
Sbjct: 355 TKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 320 bits (785), Expect = 3e-86
Identities = 149/225 (66%), Positives = 173/225 (76%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
QKKAHIME GGT+ + Q + +PV SVF+Q E+ID I TSR
Sbjct: 175 QKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSR 234
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
WHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTE+NKKI+RIG+G H +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHME 294
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
DGK++KNNAST YD++ KSITP+GGFPHYGEVNNDFVM+KGC G KKR+ITLRKSL VH
Sbjct: 295 DGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVH 354
Query: 228 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 94
R A+E I LKFIDT+SKFGHGRFQT +K AFMG KK +E
Sbjct: 355 HSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKHLEKE 399
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 269 bits (659), Expect = 6e-71
Identities = 128/190 (67%), Positives = 149/190 (78%)
Frame = -3
Query: 663 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 484
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 483 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 304
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 303 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 124
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 123 GTLKKDRIRE 94
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 252 bits (616), Expect = 1e-65
Identities = 121/225 (53%), Positives = 149/225 (66%)
Frame = -3
Query: 765 KKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 586
KKAH+ E GGTI + E+ + + + +DSVF Q E D RW
Sbjct: 230 KKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRW 289
Query: 585 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 406
LPRKTH+GLRKVACIGAWHPSRV +TVARAGQ GYHHRT +NKKIY++G+ + +
Sbjct: 290 GVACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEP 349
Query: 405 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 226
N A+T YDL+ K+ITPMGGF YG V ND+VM+KG GP++R+ITLR+ + T
Sbjct: 350 -----NQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQT 404
Query: 225 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 91
R EKI LKFIDTSSK GHGRFQT +K+ + G LKKDRIR E
Sbjct: 405 SRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLKKDRIRRE 449
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 191 bits (466), Expect = 1e-47
Identities = 104/221 (47%), Positives = 139/221 (62%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
QKKAH+ ES G + + + + + +PV+ +F + I +S
Sbjct: 132 QKKAHLTESQVNRGPV-AKLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKGKHYKGISSH 189
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKKIY+IGQG K
Sbjct: 190 WYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKKIYKIGQGYLIK 242
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM+K C +G KKR+++L KSL +
Sbjct: 243 NGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTKKRVLSLCKSLLMR 299
Query: 228 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 106
TK+ L+K+N KFIDT+SKFGHG FQ +K FMG LKKD
Sbjct: 300 TKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLKKD 340
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 184 bits (448), Expect = 2e-45
Identities = 94/214 (43%), Positives = 134/214 (62%)
Frame = -3
Query: 765 KKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 586
KK + E+ GG+ + E + + + I ++S+F ++++ID I SRW
Sbjct: 158 KKKYFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRW 217
Query: 585 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 406
+LPRKTH+GLRKVACIG W PSRV++T++RAGQKGYH RT NKKIY+IG +++
Sbjct: 218 GITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIGS---EEN 274
Query: 405 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 226
N+ S D KS+ MGGF +G +NND+++IKG G KR I LRK+++
Sbjct: 275 FSYYSNSLS---DSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGSSKRPILLRKNIKNKI 331
Query: 225 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 124
EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 332 SSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 182 bits (442), Expect = 1e-44
Identities = 97/188 (51%), Positives = 123/188 (65%)
Frame = -3
Query: 654 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 475
QDE+ID I T + P + +G K+ C+GAWHP+RV+F+VA+ GQK
Sbjct: 193 QDEIIDVIKETKGNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQK 251
Query: 474 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 295
GYHH + NKKI +IGQG KDGK+IKNNA TEY LS+KSI +GGF HYGEV NDF+
Sbjct: 252 GYHHNGD-NKKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIR 310
Query: 294 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 115
+KGC + KK +T+ K L V T + AL+KI+ K DT+ K GHG FQT K AF+G L
Sbjct: 311 LKGCAVRTKKH-LTICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPL 369
Query: 114 KKDRIREE 91
KK+ EE
Sbjct: 370 KKECTAEE 377
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 132 bits (320), Expect = 7e-30
Identities = 73/199 (36%), Positives = 108/199 (54%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+KK +ME G ++ + + G+ + V V + E++D I R
Sbjct: 177 KKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKR 236
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
W K K KG RKV IG WHP+RV +TV AGQ G+HHRTE+NK++ IG+
Sbjct: 237 WGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE----- 291
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
+GK +K + +TE + ITP GGFPHYG V +DF+MI G G KRII +R ++R
Sbjct: 292 NGK-LKLDENTEIE-----ITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPP 345
Query: 228 TKRAALEKINLKFIDTSSK 172
K+ +++ + ++ SK
Sbjct: 346 KKKPPVQRPQITYVSVESK 364
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 113 bits (273), Expect = 4e-24
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = -3
Query: 405 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 226
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M+KGC +G KKR++TLRKSL V T
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQT 60
Query: 225 KRAALEK 205
KR ALEK
Sbjct: 61 KRRALEK 67
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 104 bits (250), Expect = 2e-21
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+KK I+E G I + + G+ + + VF + E++D I R
Sbjct: 154 KKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKR 213
Query: 588 WHTK-KLPRKTHKGL-RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 415
W K + + KG+ R V IG W P V ++V GQ GYH RTE NK+I +IG
Sbjct: 214 WGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIG---- 269
Query: 414 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
NN ITP GGF HYG + N++V++KG GP KR+I LR+++R
Sbjct: 270 --------NNGD--------EITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIR 313
Query: 234 VHTKRAALEKINLKFIDTSSKFG 166
+ ++ + +I T+SK G
Sbjct: 314 --PQEPLIKVPEITYISTTSKQG 334
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 99 bits (238), Expect = 6e-20
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+K +ME+ GG + + E + G+ + + VFA E++D R
Sbjct: 157 KKVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVR 216
Query: 588 WHTKKLPRKTHKGLRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 415
W RK + +K V +G W+P R+ + V + GQ GYH RTE NK+I ++G
Sbjct: 217 WGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMG---- 272
Query: 414 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
D +E+ ITP GGF HYG + ND++M+KG GP KR++ +R ++R
Sbjct: 273 ---------------DKAEE-ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAVR 316
Query: 234 VHTKRAALEKINLKFIDTSSKFG 166
K + + ++ T SK G
Sbjct: 317 --PKNMPKQAPEITYLSTQSKMG 337
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 97.5 bits (232), Expect = 3e-19
Identities = 66/200 (33%), Positives = 91/200 (45%)
Frame = -3
Query: 765 KKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 586
K IME GG + Q + GE + ++ VF ID I R+
Sbjct: 160 KSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRF 219
Query: 585 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 406
K L K K R++ +G + V T+ +AGQ GYH RTE NK+I RI
Sbjct: 220 GVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKRILRI-------- 271
Query: 405 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 226
A E E ITP GGF HYGEV N +++I+G GP KR+I R + R
Sbjct: 272 -------AGEE----ESQITPAGGFLHYGEVKNHYMIIQGSLPGPAKRLIRFRDAAR--- 317
Query: 225 KRAALEKINLKFIDTSSKFG 166
R +++ ++ T+SK G
Sbjct: 318 PRREQPPVDITYVSTASKQG 337
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 96.7 bits (230), Expect = 6e-19
Identities = 61/196 (31%), Positives = 90/196 (45%)
Frame = -3
Query: 753 IMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKK 574
IME GG + E G I +D V+ + +D + R+ K
Sbjct: 184 IMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKL 243
Query: 573 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVI 394
L K K R++ +G + V T+ +AGQ GYH RTE+NK+I RI
Sbjct: 244 LSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRILRISNP--------- 294
Query: 393 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 214
E +TP GGF HYGEV N +++++G GP KR++ R +R HT
Sbjct: 295 ----------GESDVTPAGGFLHYGEVTNPYMVLEGSLPGPAKRLLRFRDPVRPHTN--- 341
Query: 213 LEKINLKFIDTSSKFG 166
+ ++L ++ TSSK G
Sbjct: 342 VFDVDLTYVSTSSKQG 357
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 95.9 bits (228), Expect = 1e-18
Identities = 58/178 (32%), Positives = 85/178 (47%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
QKK +I E+ GG I Q + G+ I +D +F +D R
Sbjct: 155 QKKPYIFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKR 214
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
W+ KK K+ K +R+V +G P V +TV RAGQ G+H R E +K+I +G
Sbjct: 215 WNVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMG------ 268
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
+T+ D + I P GGF H+G V DF+++KG G +R+I LR +R
Sbjct: 269 ---------NTDDD--KLKINPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIKLRSQIR 315
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 93.1 bits (221), Expect = 7e-18
Identities = 62/180 (34%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+KK +ME G + + E E I VF + E++D R
Sbjct: 160 KKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKR 219
Query: 588 WHTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 415
W RKT + R + IG PSRV +TV AGQ GYH RTE NK+I +IG+
Sbjct: 220 WGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGE--- 276
Query: 414 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
DG + +TP GGF +YG V D++MI G GPKKR+I +R ++R
Sbjct: 277 --DG---------------EEVTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVRPAVR 319
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 86.6 bits (205), Expect = 6e-16
Identities = 56/199 (28%), Positives = 93/199 (46%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+K I + G + + E G+ + ++ VF + + +D I R
Sbjct: 147 KKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKR 206
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
+H + K+ KG+RKV IG+ P R+ TV GQ GYH RTE NK I +IG+ ++ +
Sbjct: 207 FHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEPLNVE 266
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
GG+ YG+V +++KG GP+KR+I LR+++R
Sbjct: 267 -----------------------GGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPP 303
Query: 228 TKRAALEKINLKFIDTSSK 172
K+ +E +++I S K
Sbjct: 304 RKQEKVE--GIEYISLSPK 320
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 85.4 bits (202), Expect = 1e-15
Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Frame = -3
Query: 765 KKAHIMESXXXGG-TIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
KK I E GG ++ + E G+ I + + +D + R
Sbjct: 150 KKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQR 209
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
+ K LPRK K R + +G WHP V TV +AGQ GY RT N ++ + +G
Sbjct: 210 FGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKG---- 265
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
+A T I GGF HYG V ND+V++ G GP KR+I +R R
Sbjct: 266 ------EDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPAR-- 309
Query: 228 TKRAALEKINLKFIDTSSKFG 166
K ++ + L +I SK G
Sbjct: 310 QKVPDIDNVKLDYISLESKQG 330
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -3
Query: 279 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 100
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKD+
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147
Query: 99 REE 91
+E
Sbjct: 148 AKE 150
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 83.4 bits (197), Expect = 6e-15
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRT--SGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXT 595
+K +ME+ GGT+ + E G VF E D
Sbjct: 154 KKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPV 213
Query: 594 SRWHTKKLPRK-THKGLRK-VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 421
RW +K K +G R+ + +G W+PSRV TV + GQ GYH RTE+NK++ I G
Sbjct: 214 KRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDG 273
Query: 420 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 241
TP GGFP+YGEV+ + ++KG GP++R++ R +
Sbjct: 274 ---------------------DEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPA 312
Query: 240 LRVHTKRAALEKINLKFIDTSSKFG 166
+R + + L+ ++++ T+S G
Sbjct: 313 VRPN-ESPRLDP-EVRYVSTASNQG 335
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 82.2 bits (194), Expect = 1e-14
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+KK I+E GGT+ + + ++ G + VD VF + + ID I R
Sbjct: 215 KKKPEIIEIKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKR 274
Query: 588 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFT-VARAGQKGYHHRTEMNKKIYRIGQGI 418
+ K+LPR K KG RK IG+ P + + + GQ G+H RTE NK+I +IG
Sbjct: 275 FGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIG--- 328
Query: 417 HKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSL 238
++ +TP GGF YG V ++M+ G +GP+KR++ LR +
Sbjct: 329 -----------------INGWEVTPKGGFLGYGIVYGPYIMLHGSIIGPRKRLLVLRHPI 371
Query: 237 R 235
R
Sbjct: 372 R 372
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 80.2 bits (189), Expect = 5e-14
Identities = 50/189 (26%), Positives = 84/189 (44%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
QK+ +I E+ GG++ + + G+ + V +D R
Sbjct: 153 QKRPYIFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQR 212
Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409
K+ K+ K +R++ +G P V +TV RAGQ G+H R E NK+I +G
Sbjct: 213 MGAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSA---- 268
Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229
G+ + +I P GG+ H+G V D++++KG G +R++ LR +R
Sbjct: 269 -GE-------------DDAINPSGGYKHFGMVKGDYIVLKGSVPGTYRRLVKLRAQIRNA 314
Query: 228 TKRAALEKI 202
KR + I
Sbjct: 315 PKRTSKPNI 323
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 74.9 bits (176), Expect = 2e-12
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+KK ++E GG + G+ + + VF + + ID I R
Sbjct: 153 KKKPELIE-IAVGGPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKR 211
Query: 588 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 415
+ +++PR K KG ++ +G P+ + F GQ G+H RTE NK+I ++G
Sbjct: 212 FGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYNKRILKVG---- 266
Query: 414 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
D + S K I P GG+PHYG V + F++++G G KR++ LR ++R
Sbjct: 267 --DAE------------SLKEINPPGGWPHYGLVRSQFIIVEGSVPGAVKRLVRLRHAIR 312
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 73.3 bits (172), Expect = 6e-12
Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Frame = -3
Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589
+K ++E GG Q + G+ I + VF + ++ID + R
Sbjct: 173 KKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKR 232
Query: 588 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 415
+ +LPR K KG RK+ G S+T + GQ G+H RTE NK+I +IG
Sbjct: 233 YSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD--- 287
Query: 414 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
K I P GGF YG V N +V+++G +G KKR I LR+ +R
Sbjct: 288 -----------------EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLREPVR 330
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 72.1 bits (169), Expect = 1e-11
Identities = 62/207 (29%), Positives = 91/207 (43%), Gaps = 6/207 (2%)
Frame = -3
Query: 768 QKKAHIMESXXXG-GTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 592
+KK ++E G + + + G I V+ VF + +++D I
Sbjct: 160 KKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIK 219
Query: 591 RWHTKKLPR--KTHKGLRKVACIGAWHPSRVSF-TVARAGQKGYHHRTEMNKKIYRIGQG 421
RW K+LPR K KG R+ IGA R +F +AGQ G+H RTE NK+I I
Sbjct: 220 RWGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDD 276
Query: 420 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 241
+K +TP GGF YG V + FVM+ G G KR I +R +
Sbjct: 277 GYK--------------------VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWA 316
Query: 240 LRVHT--KRAALEKINLKFIDTSSKFG 166
+R + + K + +I +SK G
Sbjct: 317 IRPPEWYLKLGVRKPEITYISLASKQG 343
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 61.3 bits (142), Expect = 3e-08
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Frame = -3
Query: 765 KKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 586
KKA + GG+ E + G+ + V+ V + +D I R+
Sbjct: 179 KKAPDILEVKVGGSPVEALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKRF 238
Query: 585 HTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK 412
K+LP+ K KG R+V +W S+ V + GQ GYH RT+ NK++ I K
Sbjct: 239 GVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMISDDPSK 296
Query: 411 KDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 235
I GG+ HYG V + +V++KG GP KR I +R +R
Sbjct: 297 --------------------INVEGGWLHYGLVKSKYVVLKGSVFGPPKRPIIMRLPVR 335
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/102 (30%), Positives = 49/102 (48%)
Frame = +1
Query: 463 VMITFLTSTSYSERHPRRMPSSNAGNFPKXXXXXXXXXXXXPTRSDTFVSFALGDTNAVN 642
+++T LTS+ + MPS+N N + P+ DT + GD+N +N
Sbjct: 1 MVVTVLTSSGNGPVNVSWMPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDIN 60
Query: 643 HFILGKHRIDRDRFSRCSLAHFTLSSNGTTXXXGFHNVSLLL 768
HFIL ++R++R+ F + +GTT F VS LL
Sbjct: 61 HFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLL 102
>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
- Homo sapiens (Human)
Length = 103
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -1
Query: 239 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSRRRLTRLHSWVH 117
C C + G +R T +SLTP PS M SR R HSW H
Sbjct: 63 CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103
>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1482
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +1
Query: 250 KSNDTLFRSHAATLDHHKVVVYFTIMGETSHRCNGFLRQIILSRCIVFNNFAILFVDSLS 429
+ N+ + TL H ++ YF + +SH +II + +++NNFA +F+ L
Sbjct: 450 QKNNIKYNIKWLTLFFHSLIQYFVYLNNSSHILINHKDKIIFIKHLLYNNFAQMFLKYL- 508
Query: 430 NTIDFLVHFSTVMITFLTST 489
D V+F+ + I + S+
Sbjct: 509 --CDNYVYFTPINILSIYSS 526
>UniRef50_Q9P0F5 Cluster: HSPC081; n=1; Homo sapiens|Rep: HSPC081 -
Homo sapiens (Human)
Length = 92
Score = 35.1 bits (77), Expect = 2.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 650 SWANTESTGIGSPDVLWPISLCP 718
SW N+ S G+G+P +LWP LCP
Sbjct: 26 SWPNSPSLGVGAPIILWP-GLCP 47
>UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 685
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -3
Query: 438 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 259
YR G H DG + NNA++++ +K +P F GE + ++ G + K
Sbjct: 567 YRSSWGYHGDDGAIFLNNANSDFSYYKKE-SPSDDFGAKGEFGANDIVGVGLNLETGKGF 625
Query: 258 ITLRKSLR 235
+TL +LR
Sbjct: 626 VTLNGNLR 633
>UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 587
Score = 33.5 bits (73), Expect = 6.1
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -3
Query: 480 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 301
++ H E++K +G+GI+ + + N S YD S GF + N F
Sbjct: 140 EQNIHLVAEISKSRPYVGEGIYVEYRLYVSENVSV-YDTSVTEAPQYNGFWNQEIKINGF 198
Query: 300 VMIKGCCMGPKKRIITLRKSLRVHTKRAAL 211
+ G G R I L+K+L + TK L
Sbjct: 199 PVKMGKYNGENYRYIVLQKALLIPTKTGRL 228
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 33.1 bits (72), Expect = 8.0
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -3
Query: 318 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLK 193
++ N+ +++KG GPK + ++ +++ R A+E +N+K
Sbjct: 181 DIKNNILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIK 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,465,129
Number of Sequences: 1657284
Number of extensions: 16022283
Number of successful extensions: 37782
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 36594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37766
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -