Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M02
(779 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 25 0.90
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 24 1.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 6.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 6.3
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 6.3
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 6.3
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 6.3
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 6.3
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 6.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 6.3
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 22 6.3
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 6.3
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 8.4
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 24.6 bits (51), Expect = 0.90
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = +1
Query: 406 ILFVDSLSNTIDFLVHFSTVMIT 474
+LF+ ++T+ F+++ ST++IT
Sbjct: 346 VLFIQVAADTVLFILNISTIIIT 368
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 488 VLVRKVIITVLK*TRKSIVLDKES 417
+L K I+T+LK T+ +I + KES
Sbjct: 85 LLYSKQIVTILKKTKSNIFILKES 108
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 346 TDGRFPPLW 320
T+GR PP+W
Sbjct: 216 TEGRLPPVW 224
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 60 STSSTGVASPQDLSTNGAPPRSTPP 84
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 659 NTESTGIGSPDVLWPISLCPXMVPP 733
+T STG+ SP L P PP
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPP 128
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 121 YTQEGSYSRRSCGY 80
Y Q +Y SCGY
Sbjct: 338 YDQSSAYDASSCGY 351
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,923
Number of Sequences: 336
Number of extensions: 4062
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -