BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M02 (779 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 281 4e-76 12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 274 7e-74 03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.1 08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.2 >11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283, 3276406-3276815,3276942-3277200 Length = 389 Score = 281 bits (689), Expect = 4e-76 Identities = 134/219 (61%), Positives = 160/219 (73%) Frame = -3 Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589 QKKAH+ME GGTI + + G + + IPVD+VF +DEMID I +R Sbjct: 176 QKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 235 Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409 W +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----K 290 Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229 G+ + A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL Sbjct: 291 SGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQ 349 Query: 228 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 112 T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK Sbjct: 350 TSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388 >12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738, 3429821-3430230,3430323-3430556,3430934-3431378, 3432300-3432390,3433292-3433518,3433786-3433861, 3434009-3434134,3434221-3434384 Length = 757 Score = 274 bits (671), Expect = 7e-74 Identities = 130/211 (61%), Positives = 156/211 (73%) Frame = -3 Query: 768 QKKAHIMESXXXGGTIXGQSEMGQRTSGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 589 QKKAH+ME GGTI + + G + + IPVD+VF +DEMID I +R Sbjct: 176 QKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 235 Query: 588 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 409 W +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----K 290 Query: 408 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 229 G+ + A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL Sbjct: 291 SGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQ 349 Query: 228 TKRAALEKINLKFIDTSSKFGHGRFQTPADK 136 T R ALE+I LKFIDTSSKFGHGRFQT +K Sbjct: 350 TSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380 >03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393, 30366541-30366849,30367544-30370567,30370640-30372290, 30372373-30373463,30373544-30373646,30373737-30374439, 30374654-30375783,30375913-30376027,30376504-30376695, 30377443-30377616,30378438-30378494,30378581-30378716, 30378842-30378927,30379023-30379092,30379993-30380021, 30380444-30380456,30380762-30381006 Length = 3582 Score = 29.5 bits (63), Expect = 3.1 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = -3 Query: 369 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 274 D + + +P+GG P YG ++ D + C +G Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402 >08_02_0918 - 22617388-22617693,22617799-22617848,22618538-22618817, 22619654-22620340,22622870-22622944,22623150-22623285, 22624801-22625093,22625776-22626597 Length = 882 Score = 28.3 bits (60), Expect = 7.2 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%) Frame = -3 Query: 513 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 364 ++V F + GY H + +N ++ I G IH+ D + E L Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419 Query: 363 SEKSITPMGGFPHYGEVNN 307 SEKS P+ FP V++ Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,726,129 Number of Sequences: 37544 Number of extensions: 458169 Number of successful extensions: 1113 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1078 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1111 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2091906552 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -