Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L19
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 37 0.022
04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704... 31 1.1
03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-65... 31 1.1
02_01_0331 + 2331774-2331985,2332825-2332952,2333392-2333452,233... 31 1.1
10_08_0299 - 16607152-16607322,16607465-16607785,16607870-166081... 30 1.9
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 30 1.9
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 30 1.9
03_05_1069 + 30118930-30120120 29 3.3
03_05_0373 + 23581812-23583293 29 3.3
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 29 4.4
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 29 4.4
03_05_1044 + 29908348-29908503,29909495-29909626,29910049-299103... 29 5.8
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 29 5.8
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 28 7.7
02_01_0692 + 5179778-5181847 28 7.7
>07_03_1781 +
29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -3
Query: 196 WPISGGVVETAELTDR----QVLLTGHEDGSVRFWDVTGVAMTPLY 71
W ++GGV + + ++ + G++D SVR WD T +TP++
Sbjct: 450 WRLTGGVPSEMSMNENYTVERIYIAGYQDSSVRIWDATFPVLTPMF 495
>04_04_0815 -
28269918-28270022,28270164-28270226,28270342-28270460,
28270586-28270684,28270761-28270953,28271024-28271117,
28271339-28271394,28272372-28272431,28272877-28272989,
28273286-28273343,28273429-28273521,28273659-28273904,
28274990-28275371,28275523-28275595,28275692-28275795,
28275872-28275963,28275996-28276106,28276225-28276309,
28276385-28276518,28278264-28278302
Length = 772
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 151 RQVLLTGHEDGSVRFWDVT 95
R + +TGH DG++RFWD +
Sbjct: 391 RNLYVTGHLDGTIRFWDAS 409
>03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-653886,
654027-654247,654395-654533,654628-654710,654824-655036,
655099-655494,655587-655758,656085-656276,656363-656569,
656661-656753,656957-657156,657329-657838,658114-658184,
658322-658963,659057-659207,659425-659665
Length = 1360
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 169 TAELTDRQVLLTGHEDGSVRFWDVT 95
TA+ D ++++G DGS+ FWD+T
Sbjct: 1018 TADHGDTYIVVSGSTDGSITFWDLT 1042
>02_01_0331 +
2331774-2331985,2332825-2332952,2333392-2333452,
2333878-2334035,2335001-2335083,2336364-2336468,
2336659-2336756,2337136-2337256,2337366-2337416,
2337987-2338179,2338277-2338845,2338964-2339017,
2339250-2339412,2340155-2340417,2340530-2340717,
2341875-2341945,2342021-2342309,2343962-2344027,
2344186-2344303,2344468-2344575,2344656-2344805,
2344892-2345065,2345161-2345232
Length = 1164
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 175 VETAELTDRQVLLTGHEDGSVRFWDV 98
+ TA + +R++L H DGS+R WD+
Sbjct: 144 IVTATVNERELLFVLHLDGSLRIWDI 169
>10_08_0299 -
16607152-16607322,16607465-16607785,16607870-16608121,
16608298-16608435,16608544-16608651,16608814-16609014,
16609109-16609233,16609252-16609321,16609919-16610455
Length = 640
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 151 RQVLLTGHEDGSVRFWDVT 95
++ +LT EDGS+R WDV+
Sbjct: 286 KETILTSSEDGSIRLWDVS 304
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 190 ISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMT 80
+SG + D L +GH DG +R WD+ T
Sbjct: 352 MSGSNANSLAFIDGVTLCSGHRDGHLRLWDIRSAKCT 388
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 181 GVVETAELT-DRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQL 50
G + T T D + ++TG ED V+ WD+T + +K+ + Q+
Sbjct: 241 GAIRTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLHDFKFHSGQI 285
>03_05_1069 + 30118930-30120120
Length = 396
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 187 SGGVVETAELTDRQVLLTGHEDGSVRFWDVT 95
S G+V+ ++ ++ TGH+DG +R W V+
Sbjct: 61 SSGLVKAIVISGERIF-TGHQDGKIRVWKVS 90
>03_05_0373 + 23581812-23583293
Length = 493
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 181 GVVETAELTDRQVLLTGHEDGSVRFW 104
G+V+ + D + TGH+DG VR W
Sbjct: 146 GLVKAIVVADDGRIFTGHQDGKVRVW 171
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 151 RQVLLTGHEDGSVRFWDVTGVAMTP 77
R +L+T +DGSV WD T A TP
Sbjct: 189 RHILVTAGDDGSVHLWDTT--ARTP 211
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 184 GGVVETAELTDRQVLLTGHEDGSVRFWDV 98
G +V +D Q L TG EDG VR W V
Sbjct: 272 GAIVTMKFSSDGQYLATGGEDGVVRVWRV 300
>03_05_1044 +
29908348-29908503,29909495-29909626,29910049-29910364,
29910447-29910510,29910614-29910727,29910806-29910968,
29911166-29911316,29911403-29911986,29912313-29912542,
29912791-29913045,29913293-29913590
Length = 820
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 190 ISGGVVETAELTDRQVLLTGHEDGSVRFWDVT 95
+SG ++ A D + + +G DG +R WD T
Sbjct: 200 VSGRMLSVAWSNDAKFIFSGSSDGLIRCWDST 231
>01_05_0309 - 20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 187 SGGVVETAELTDRQVLLTGHEDGSVRFWD 101
+G V + + + + LTG +DG V+ WD
Sbjct: 2013 TGSVSSVSTIPNTSLFLTGSKDGDVKLWD 2041
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 160 LTDRQVLLTGHEDGSVRFWDVT 95
L D + ++G DG +R WD+T
Sbjct: 363 LADENLFISGSIDGKIRVWDIT 384
>02_01_0692 + 5179778-5181847
Length = 689
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 333 LPYLVSVHASAVTTAQLADGVAPAVYDNIVAA 238
+ YL++V A+AV + D VAP D +V A
Sbjct: 87 ISYLLNVAAAAVADSNAVDPVAPVAADRLVLA 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,907,777
Number of Sequences: 37544
Number of extensions: 314597
Number of successful extensions: 1174
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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