Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L19
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 50 1e-06
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 50 1e-06
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 50 1e-06
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 50 1e-06
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 50 1e-06
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 50 1e-06
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 50 1e-06
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z83102-5|CAB05468.1| 179|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 29 5.2
U21308-5|AAB93318.1| 258|Caenorhabditis elegans Warthog (hedgeh... 28 6.9
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 6.9
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 6.9
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 28 9.1
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 28 9.1
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 9.1
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 367 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 426
Query: 52 LF 47
F
Sbjct: 427 HF 428
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 367 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 426
Query: 52 LF 47
F
Sbjct: 427 HF 428
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 402 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 461
Query: 52 LF 47
F
Sbjct: 462 HF 463
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 402 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 461
Query: 52 LF 47
F
Sbjct: 462 HF 463
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 402 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 461
Query: 52 LF 47
F
Sbjct: 462 HF 463
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 367 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 426
Query: 52 LF 47
F
Sbjct: 427 HF 428
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -3
Query: 232 TTXRRINXSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQ 53
T R S WP++GG+ +++++TGH+DGS++FW TG + LYK ++
Sbjct: 402 TKQRNKEFSARSWPVTGGLGRECATGHQELVVTGHKDGSLKFWQETGEHLQILYKLKSSS 461
Query: 52 LF 47
F
Sbjct: 462 HF 463
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 151 RQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLF 47
RQV L+GH +G++ W GV M+ + T+ F
Sbjct: 457 RQVYLSGHSNGNICIWSSGGVGMSLMLVIRTSLEF 491
>Z83102-5|CAB05468.1| 179|Caenorhabditis elegans Hypothetical
protein C54C8.6 protein.
Length = 179
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 318 SVHASAVTTAQLADGVAPAVYDNIVAAG 235
S+H S +T++ L D AP V+ N+V G
Sbjct: 28 SIHCSTLTSSGLFDSTAPRVFKNLVNYG 55
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 187 SGGVVETAELTDRQVLLTGHEDGSVRFWDVT 95
+G VV ++ Q L+TG D V+ WDVT
Sbjct: 995 TGSVVSLQLTSNNQFLITGSGDFVVQMWDVT 1025
>U21308-5|AAB93318.1| 258|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 10 protein.
Length = 258
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 579 VHXLQCSRGEKHVAFD--FTSRVIDLFTTTPVPPDGAPLQEE 460
V+ + C++GEK V FD T+ + TTP P ++EE
Sbjct: 149 VYRMICAKGEKPVDFDPITTTSAPRVIKTTPAPTTTPTVEEE 190
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -1
Query: 678 AITQDPEQD*ASMERKITIXCRVACPRASYSRXVHXLQCSRGEKHVAFDFTSRVIDLFTT 499
A+T P+ D +M+ I C + C ++S S+ + C R +F R ++
Sbjct: 288 AVTVVPKAD-VTMKSHIKACCVIGCEKSSNSKTIMCKTCCR-----SFHSGCREVETLNG 341
Query: 498 TPVPPD 481
P+P D
Sbjct: 342 KPIPDD 347
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -1
Query: 678 AITQDPEQD*ASMERKITIXCRVACPRASYSRXVHXLQCSRGEKHVAFDFTSRVIDLFTT 499
A+T P+ D +M+ I C + C ++S S+ + C R +F R ++
Sbjct: 288 AVTVVPKAD-VTMKSHIKACCVIGCEKSSNSKTIMCKTCCR-----SFHSGCREVETLNG 341
Query: 498 TPVPPD 481
P+P D
Sbjct: 342 KPIPDD 347
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 142 LLTGHEDGSVRFWDVTG 92
L+TG DG++RFW+ G
Sbjct: 406 LITGGSDGTIRFWNFNG 422
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 142 LLTGHEDGSVRFWDVTG 92
L+TG DG++RFW+ G
Sbjct: 406 LITGGSDGTIRFWNFNG 422
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 142 LLTGHEDGSVRFWDVTG 92
L+TG DG++RFW+ G
Sbjct: 406 LITGGSDGTIRFWNFNG 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,504,302
Number of Sequences: 27780
Number of extensions: 215065
Number of successful extensions: 607
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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