Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L17
(816 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer pr... 50 5e-06
AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA... 50 5e-06
AY051489-1|AAK92913.1| 456|Drosophila melanogaster GH14572p pro... 33 0.35
AE013599-2436|AAF57889.1| 456|Drosophila melanogaster CG11395-P... 33 0.35
AE014297-3627|AAF56337.2| 637|Drosophila melanogaster CG6892-PA... 31 2.5
BT023671-1|AAY85071.1| 87|Drosophila melanogaster IP04473p pro... 30 4.4
AE014298-1779|AAF48173.1| 341|Drosophila melanogaster CG15729-P... 30 4.4
AE013599-621|AAM68858.1| 87|Drosophila melanogaster CG30369-PA... 30 4.4
AY119230-1|AAM51090.1| 640|Drosophila melanogaster SD17695p pro... 29 7.6
AE014297-3628|AAS65212.1| 640|Drosophila melanogaster CG6892-PB... 29 7.6
>AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer
protein.
Length = 1854
Score = 49.6 bits (113), Expect = 5e-06
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1
Query: 357 DAFRCRPPNTSRPPSLHVDDFTAL 286
D FR RPPNTSRPPSLHVDDF AL
Sbjct: 1734 DLFRSRPPNTSRPPSLHVDDFLAL 1757
>AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA
protein.
Length = 1854
Score = 49.6 bits (113), Expect = 5e-06
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1
Query: 357 DAFRCRPPNTSRPPSLHVDDFTAL 286
D FR RPPNTSRPPSLHVDDF AL
Sbjct: 1734 DLFRSRPPNTSRPPSLHVDDFLAL 1757
>AY051489-1|AAK92913.1| 456|Drosophila melanogaster GH14572p
protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.35
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -1
Query: 204 HAHYRHTRGRGAWEVGAPH--FGHYPPAPQYMLGGACRGPRGP 82
H H+ H G G +G P FG +PP P Y G R P
Sbjct: 47 HGHHVHGSGYGPGSIGPPPFVFGRFPPPPSYYPDNQPSGGRQP 89
>AE013599-2436|AAF57889.1| 456|Drosophila melanogaster CG11395-PA
protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.35
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -1
Query: 204 HAHYRHTRGRGAWEVGAPH--FGHYPPAPQYMLGGACRGPRGP 82
H H+ H G G +G P FG +PP P Y G R P
Sbjct: 47 HGHHVHGSGYGPGSIGPPPFVFGRFPPPPSYYPDNQPSGGRQP 89
>AE014297-3627|AAF56337.2| 637|Drosophila melanogaster CG6892-PA,
isoform A protein.
Length = 637
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 408 GLLSSQERGSVLXVEAAGQPPHGAGDRLPPGMTRRPRTGSCSPLP*CRTVLIHDREHSPS 587
GL S +++ + +++ G HG G L + +T P P + + + SP+
Sbjct: 145 GLQSERKKCPISDLDSGGHG-HGQGHGLMEAICAGQKTSPIPPPPPPCCLTLGESSSSPN 203
Query: 588 PLA-EGMFNQLXGGESLVRRAPPGLCTV 668
P+A + N G S A LC V
Sbjct: 204 PIATAALMNASTSGSSSAGGASASLCNV 231
>BT023671-1|AAY85071.1| 87|Drosophila melanogaster IP04473p
protein.
Length = 87
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 360 PDAFRCRPPNTSRPPSLHVDDFTALHH 280
PDA P ++RPP + V F ALHH
Sbjct: 35 PDARIKTPAQSTRPPRILVKSFLALHH 61
>AE014298-1779|AAF48173.1| 341|Drosophila melanogaster CG15729-PA
protein.
Length = 341
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 317 GGREVLGGRQRNASGASPRPRDTRTPR--FHCGPLVVAGAGLGPG 445
GG ++GG A+ A+P+ DT + F G LVVA GL G
Sbjct: 25 GGDGIIGGPATGATAATPQSTDTISSAGGFGDGQLVVAVQGLASG 69
>AE013599-621|AAM68858.1| 87|Drosophila melanogaster CG30369-PA
protein.
Length = 87
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 360 PDAFRCRPPNTSRPPSLHVDDFTALHH 280
PDA P ++RPP + V F ALHH
Sbjct: 35 PDARIKTPAQSTRPPRILVKSFLALHH 61
>AY119230-1|AAM51090.1| 640|Drosophila melanogaster SD17695p
protein.
Length = 640
Score = 29.1 bits (62), Expect = 7.6
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +3
Query: 408 GLLSSQERGSVLXVEAAGQPPHGAGDRLPPGMTRRPRTGSCSPLP*CRTVLIHDREHSPS 587
GL S +++ + +++ G HG G L + +T P P + + + SP+
Sbjct: 91 GLQSERKKCPISDLDSGGHG-HGQGHGLMEAICAGQKTSPIPPPPPPCCLTLGESSSSPN 149
Query: 588 PLA-EGMFNQLXGGESLVRRAPPGLC 662
P+A + N G S A LC
Sbjct: 150 PIATAALMNASTSGSSSAGGASASLC 175
>AE014297-3628|AAS65212.1| 640|Drosophila melanogaster CG6892-PB,
isoform B protein.
Length = 640
Score = 29.1 bits (62), Expect = 7.6
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +3
Query: 408 GLLSSQERGSVLXVEAAGQPPHGAGDRLPPGMTRRPRTGSCSPLP*CRTVLIHDREHSPS 587
GL S +++ + +++ G HG G L + +T P P + + + SP+
Sbjct: 91 GLQSERKKCPISDLDSGGHG-HGQGHGLMEAICAGQKTSPIPPPPPPCCLTLGESSSSPN 149
Query: 588 PLA-EGMFNQLXGGESLVRRAPPGLC 662
P+A + N G S A LC
Sbjct: 150 PIATAALMNASTSGSSSAGGASASLC 175
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,430,109
Number of Sequences: 53049
Number of extensions: 617891
Number of successful extensions: 1658
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -