Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_L16
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184...    29   4.5  
01_06_0581 - 30386018-30386440                                         29   4.5  

>04_01_0162 +
           1845295-1846317,1846430-1846565,1848436-1848626,
           1848780-1848887,1849001-1849204,1849294-1849525,
           1849602-1849751,1849830-1850007,1850416-1850519,
           1850611-1850933,1851274-1851459,1851672-1851899
          Length = 1020

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 589 PSRVPGGASPXKTSGTLPRELPPRQGPW 672
           PS+ P G +P  + G     +PP QGP+
Sbjct: 141 PSQGPFGTAPPPSQGPFAASVPPSQGPF 168


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 SGVRSQVLERLEMRLRSGGGGARRQ 346
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,184,945
Number of Sequences: 37544
Number of extensions: 261662
Number of successful extensions: 886
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)