Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_L14
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal prote...    54   9e-08
Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal prote...    54   9e-08
Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical p...    54   9e-08
Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical p...    54   9e-08
Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical p...    54   9e-08
Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 311 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 367

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 368 SSKTGHGRFQTTAEKRAFMG 387


>Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 311 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 367

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 368 SSKTGHGRFQTTAEKRAFMG 387


>Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 213 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 269

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 270 SSKTGHGRFQTTAEKRAFMG 289


>Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 263 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 319

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 320 SSKTGHGRFQTTAEKRAFMG 339


>Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 311 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 367

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 368 SSKTGHGRFQTTAEKRAFMG 387


>Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 213 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 269

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 270 SSKTGHGRFQTTAEKRAFMG 289


>Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 263 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 319

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 320 SSKTGHGRFQTTAEKRAFMG 339


>Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 361 LXPMGGXPPXXVXXXXDFXXDSRXXXMGP*XXYHXFLESLCVCXXKRAALEKINLKFIDT 182
           + PMGG P   +    D+    R   +GP        +SL +   KR A EKINLK+IDT
Sbjct: 311 ITPMGGFPRYGIVNQ-DYIM-LRGAVLGPKKRLITLRKSL-ITQTKRVAHEKINLKWIDT 367

Query: 181 SSKFGHGRFQTPAXQGCIHG 122
           SSK GHGRFQT A +    G
Sbjct: 368 SSKTGHGRFQTTAEKRAFMG 387


>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
           protein D2013.8a protein.
          Length = 1087

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +1

Query: 7   FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 126
           +F  +  VY+  R +++ +SRWG    S F  A+T+L+    C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,365,474
Number of Sequences: 27780
Number of extensions: 149732
Number of successful extensions: 295
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)