Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_L13
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -3

Query: 548 LERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVK 396
           LE   +Q K   ++E  N+AN+   +G    I  S  GY +     D C++
Sbjct: 207 LETACEQSK--SVEELMNIANYYRILGDTVEIFNSLFGYQIILVIFDCCLE 255


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -3

Query: 623 DKKSVTFLE*VSQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVAN 486
           DK+ +T     S  H S +  S   L ++  + K   L+E   V++
Sbjct: 379 DKREITRKSTSSSTHTSSQQTSDSFLSKRNSEKKCGSLREIKEVSD 424


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 257 TVAGIEGVQ*SHCFGHRCQ 201
           TV G  G+   HCFG+  Q
Sbjct: 2   TVTGNLGIMHRHCFGYPFQ 20


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 489 QFPWSRRTSYFHFL 448
           QFP  R   Y+HF+
Sbjct: 21  QFPTDRYVGYYHFM 34


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 195 ERTHSISLPPAWTGRSNFTG*NKNRYK 115
           ER   + L P W+ R+N T   K + K
Sbjct: 535 ERQLHMQLYPDWSSRANATRGKKRKRK 561


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 195 ERTHSISLPPAWTGRSNFTG*NKNRYK 115
           ER   + L P W+ R+N T   K + K
Sbjct: 427 ERQLHMQLYPDWSSRANATRGKKRKRK 453


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,846
Number of Sequences: 336
Number of extensions: 3691
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)