Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L13
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 83 3e-16
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 83 3e-16
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 79 3e-15
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 60 2e-09
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 58 7e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 57 1e-08
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 49 3e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 48 6e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 47 2e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 46 4e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 46 4e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 4e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 46 4e-05
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 45 7e-05
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 45 7e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 44 9e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 44 9e-05
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 44 9e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 44 1e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 1e-04
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 44 2e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 44 2e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 43 2e-04
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 43 2e-04
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 42 5e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 42 6e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 41 8e-04
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 41 0.001
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 40 0.001
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 40 0.001
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 40 0.001
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 40 0.001
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 40 0.002
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 40 0.003
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 40 0.003
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 40 0.003
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 40 0.003
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 40 0.003
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 40 0.003
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 39 0.003
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 39 0.003
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 39 0.003
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 39 0.004
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 38 0.006
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 38 0.006
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 38 0.006
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 38 0.006
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 38 0.008
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 38 0.008
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 38 0.008
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 38 0.008
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 38 0.008
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 38 0.008
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 38 0.010
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 38 0.010
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 37 0.014
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 37 0.014
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 37 0.018
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 37 0.018
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 37 0.018
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 37 0.018
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 37 0.018
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 37 0.018
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 37 0.018
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 37 0.018
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 36 0.024
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 36 0.024
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 36 0.024
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 36 0.024
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 36 0.024
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 36 0.031
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 36 0.031
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 36 0.042
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 36 0.042
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 35 0.055
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 35 0.055
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 35 0.055
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 35 0.055
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 35 0.055
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 35 0.055
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 35 0.055
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 35 0.055
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 35 0.055
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 35 0.055
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 35 0.055
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 35 0.055
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 35 0.073
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 35 0.073
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 35 0.073
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 35 0.073
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.096
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 34 0.096
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 34 0.096
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 34 0.096
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 34 0.096
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 34 0.096
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 34 0.096
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 34 0.096
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 33 0.22
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 33 0.22
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 33 0.22
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 33 0.22
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 33 0.22
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 33 0.22
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 33 0.22
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 33 0.22
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 32 0.39
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.39
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 32 0.39
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.39
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 32 0.51
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 32 0.51
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 32 0.51
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 31 0.68
At5g19850.1 68418.m02358 hydrolase, alpha/beta fold family prote... 31 0.68
At4g30510.2 68417.m04332 transport protein-related weak similari... 31 0.68
At4g30510.1 68417.m04331 transport protein-related weak similari... 31 0.68
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 31 0.68
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 31 0.68
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 31 0.68
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 0.90
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 31 0.90
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.90
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.90
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 31 0.90
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 31 0.90
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 31 1.2
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 31 1.2
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 31 1.2
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 1.2
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 31 1.2
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 31 1.2
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 31 1.2
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 31 1.2
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 30 1.6
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 30 1.6
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 1.6
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 30 1.6
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 30 2.1
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 30 2.1
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 30 2.1
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 29 2.7
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 2.7
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 2.7
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 2.7
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 29 3.6
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 29 3.6
At5g38037.1 68418.m04583 hypothetical protein 29 3.6
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 3.6
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 3.6
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 29 3.6
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 29 3.6
At3g50160.1 68416.m05483 hypothetical protein contains Pfam prof... 29 3.6
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 3.6
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 29 3.6
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 3.6
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 29 4.8
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 29 4.8
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 4.8
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 4.8
At3g50150.1 68416.m05482 expressed protein contains Pfam profile... 29 4.8
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 4.8
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 28 6.3
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 28 6.3
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 28 6.3
At5g14130.1 68418.m01653 peroxidase, putative identical to perox... 28 6.3
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 28 6.3
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 28 6.3
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 6.3
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 28 8.3
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 28 8.3
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 28 8.3
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 28 8.3
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 28 8.3
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 28 8.3
At3g20620.1 68416.m02609 F-box family protein-related contains w... 28 8.3
At2g30360.1 68415.m03695 CBL-interacting protein kinase 11 (CIPK... 28 8.3
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 28 8.3
At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containi... 28 8.3
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = -3
Query: 554 LVLERKTQQ--VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
L+L T Q VKIWD+K Q+NVA F GH G VT+IS SENGY+LATAAED V+LWDLR
Sbjct: 366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLR 424
Query: 380 KXK 372
K +
Sbjct: 425 KLR 427
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = -1
Query: 376 LKNFKTIQLEENYAIKELCFDQSGTYLAIAGTDVRVY----LCRQWQELKVFND--HTAS 215
L+NFK+ + +++ FD SG+YL IA +D++VY + +W +K D T
Sbjct: 426 LRNFKSFLSADANSVE---FDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPDLSGTGK 482
Query: 214 ATGVRFGKNAQYLASTSMDR 155
AT V+FG +AQY+A SMDR
Sbjct: 483 ATCVKFGSDAQYVAVGSMDR 502
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -2
Query: 732 HDGPVTGXSLHPTGDYVLSTXSDQHWRXQTFAPDNF*QKVSDFS-GVSLTTAQFHPDGLI 556
H V ++HPT Y +S D W + + +VSD S V T A FHPDGLI
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 555 FGTGTENSTSEDLGFKGAKQCSQF 484
GTGT S + K ++F
Sbjct: 368 LGTGTSQSVVKIWDVKSQANVAKF 391
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = -3
Query: 554 LVLERKTQQ--VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
L+L T Q VKIWD+K Q+NVA F GH G VT+IS SENGY+LATAAED V+LWDLR
Sbjct: 366 LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLR 424
Query: 380 KXK 372
K +
Sbjct: 425 KLR 427
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = -1
Query: 376 LKNFKTIQLEENYAIKELCFDQSGTYLAIAGTDVRVY----LCRQWQELKVFND--HTAS 215
L+NFK+ + +++ FD SG+YL IA +D++VY + +W +K D T
Sbjct: 426 LRNFKSFLSADANSVE---FDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPDLSGTGK 482
Query: 214 ATGVRFGKNAQYLASTSMDR 155
AT V+FG +AQY+A SMDR
Sbjct: 483 ATCVKFGSDAQYVAVGSMDR 502
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -2
Query: 732 HDGPVTGXSLHPTGDYVLSTXSDQHWRXQTFAPDNF*QKVSDFS-GVSLTTAQFHPDGLI 556
H V ++HPT Y +S D W + + +VSD S V T A FHPDGLI
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 555 FGTGTENSTSEDLGFKGAKQCSQF 484
GTGT S + K ++F
Sbjct: 368 LGTGTSQSVVKIWDVKSQANVAKF 391
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Frame = -3
Query: 554 LVLERKTQQ--VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
L+L T Q VKIWD+K Q+NVA F GH G +TSIS SENGY+LATAA D V+LWDLR
Sbjct: 367 LILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLR 425
Query: 380 KXK 372
K K
Sbjct: 426 KLK 428
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Frame = -1
Query: 376 LKNFKTIQLEENYAIKELCFDQSGTYLAIAGTDVRVYLCR----QWQELKVFND--HTAS 215
LKNF+T + +++ FD SG+YL IA +D+RV+ +W +K D T
Sbjct: 427 LKNFRTFDFPDANSVE---FDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDLSGTGK 483
Query: 214 ATGVRFGKNAQYLASTSMDRTLKLYGI 134
AT V+FG +++Y+A SMDR L+++G+
Sbjct: 484 ATSVKFGLDSKYIAVGSMDRNLRIFGL 510
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -2
Query: 765 GHXSNNGNXTFHDGPVTGXSLHPTGDYVLSTXSDQHWRXQTFAPDNF*QKVSDFS--GVS 592
G+ ++ H V ++H T Y +S D W + +V+D S V+
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 591 LTTAQFHPDGLIFGTGTENSTSEDLGFKGAKQCSQF 484
T A FHPDGLI GTGT S + K ++F
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKF 392
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WDL+ ++ F GH+ PV S++ S NGY+LA+ ED+ ++WDLR K L
Sbjct: 406 RVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSL 458
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLWDLR 381
Q +IWDL+ + ++ P H V+ + + GY+LATA+ D V +W R
Sbjct: 446 QCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -3
Query: 593 VSQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAA 414
VSQ+ + FL +V IW ++ S V + GH V S+ ++ + +AT +
Sbjct: 468 VSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVS 527
Query: 413 EDSCVKLW 390
D +KLW
Sbjct: 528 HDRTIKLW 535
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WD+ + + GH V I+ ++G A+ DS ++WDLR + +
Sbjct: 364 RLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI 416
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
K+W + + + F GH+ + ++ +G YL T + D +LWD+ EL
Sbjct: 323 KLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -3
Query: 518 WDLKEQSNVA----NFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
W LK ++A NF G P+T S S +G LAT + KLW++
Sbjct: 237 WALKHAKHMALDCSNF-GDDRPLTGCSFSRDGKILATCSLSGVTKLWEM 284
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 524 KIWDLKEQSN-VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
K+W++ + +N +A H T + S LATA+ D KLW
Sbjct: 280 KLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLW 325
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 244 LKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
+ V DH AT V F LA+ S DRT KL+
Sbjct: 291 IAVLKDHKERATDVVFSPVDDCLATASADRTAKLW 325
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 244 LKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLYGI 134
L+ F H V F + +YL +TS D+T +L+ I
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI 368
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WDL+ N+ F GH+ V S+ S NGY+LA+ ED+ ++WDLR K L
Sbjct: 155 RVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLL 207
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLWDLR 381
Q +IWDL+ + + P HV V+ + + Y+LATA+ D V +W R
Sbjct: 195 QCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGR 245
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
T S LV K Q VK+WD + + + GH V S+ ++NG +L TA++D +KL+D
Sbjct: 279 TKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD 338
Query: 386 LRKXKEL 366
+R KEL
Sbjct: 339 IRTMKEL 345
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLW 390
++L+ K Q +K++D++ + +F GH VTS++ + Y + + D + W
Sbjct: 323 NWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
GH V S+ L + +D VKLWD R +EL
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGREL 303
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
V +W Q+ + H GPV+S++ NG+ +AT+ ++ +K+WDLRK +E+
Sbjct: 263 VTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEV 316
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
VK+W+L + GH G V+++++S +G A+ +D V LWDL + K+L +S+
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL--YSLE 233
Query: 347 RKLCYQRVVFRPKRY 303
+ F P RY
Sbjct: 234 ANSVIHALCFSPNRY 248
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++++WDL + F GH V S++ S + + +A+ D +KLW+
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
VK+WD + + +F GH PV S++ S NG Y+A+ + D + +W +++ K
Sbjct: 523 VKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGK 574
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
Q +IW L + ++ H GP+ S+ ++ G YL T + D +WD++
Sbjct: 347 QARIWTLNGEL-ISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK 395
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 485 FPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
F GH G V + G LA+ ++DS K+W++++
Sbjct: 444 FTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ 479
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENG---------YYLATAAEDSCVKLWDLRKXK 372
KIW++K+ + V + H + +I S G LA+A+ DS VKLWD K
Sbjct: 473 KIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 371 EL*DHSVGRKLCYQRVVFRPK-RYIFSHS 288
L + R+ Y + F P YI S S
Sbjct: 533 MLCSFNGHREPVYS-LAFSPNGEYIASGS 560
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 235 FNDHTASATGVRFGKNAQYLASTSMDRTLKLYGIE 131
FN H + F N +Y+AS S+D+++ ++ I+
Sbjct: 537 FNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIK 571
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = -3
Query: 536 TQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
++Q+++WDL+ + ++ GH GPV ++ +G LATA D V +WD+
Sbjct: 81 SRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -3
Query: 527 VKIWDLK----EQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
V++WDL E+ +A H VTSI+LSE+G L +A D V LWDL
Sbjct: 170 VRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VKIW + + S + F GH V S +G + D +KLW++
Sbjct: 565 VKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISL--SENGYYLATAAEDSCVKLWDL 384
++V +WD+ F GH G V+SI N L + ++D+ V++WDL
Sbjct: 124 RKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/58 (20%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 554 LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGY-YLATAAEDSCVKLWDL 384
+V K + V++W+ +S + GH G + +++ ++ + + + + D +K+W L
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 569 RTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
R S + + + IW L + +V GH + S+ S + TA+ D VK+W
Sbjct: 509 RNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 45.6 bits (103), Expect = 4e-05
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+++WD+ + V FPGH G V ++ S +G L + D V+LW++
Sbjct: 81 IRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
VK+WDL++ GH +T +SLS +G YL T D+ + +WD+R
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
K+WD++++ + FP +T++S S+ + T D+ VK+WDLRK
Sbjct: 164 KLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 732 HDGPVTGXSLHPTGDYVLSTXSDQH---WRXQTFAPDN 628
H +TG SL P G Y+L+ D W + +AP N
Sbjct: 221 HQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQN 258
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLA-TAAEDSCVKLWDL 384
S +V + V+ WD++ + H V S + G L + ++D KLWD+
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 383 RK 378
R+
Sbjct: 169 RQ 170
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = -1
Query: 346 ENYAIKELCFDQSGTYLAIAGTD--VRVYLCRQWQELKVFNDHTASATGVRFGKNAQYLA 173
+ Y I + F + + G D V+V+ R+ + H + TG+ + YL
Sbjct: 179 DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLL 238
Query: 172 STSMDRTL 149
+ MD L
Sbjct: 239 TNGMDNKL 246
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 533 QQVKIWDLK-EQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+++ +W + + N GH + + + +G + +A+ D V+ WD+ K++
Sbjct: 75 REIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQI 131
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+K+WD++E V F GH +++ G +LA+ + D+ +K+WD+RK
Sbjct: 82 IKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
FL +KIWD++++ + + GH +++I + +G ++ + D+ VK+WDL
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Query: 377 XKEL 366
K L
Sbjct: 174 GKLL 177
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VK+WDL + F H GP+ S+ + LAT + D VK WDL
Sbjct: 166 VKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSV 351
+V +W + + +++ + GH V S++ + A +KLWD+ + K + +
Sbjct: 39 KVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTG 98
Query: 350 GRKLCYQRVVFRP 312
R C V F P
Sbjct: 99 HRSNC-SAVEFHP 110
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -2
Query: 735 FHDGPVTGXSLHPTGDYVLSTXSD----QHWRXQTFAPDNF*QKVSDFSGVSLTTAQFHP 568
FH+GP+ HP +++L+T S + W +TF + + +GV + +FHP
Sbjct: 182 FHEGPIRSLDFHPL-EFLLATGSADRTVKFWDLETF--ELIGSTRPEATGV--RSIKFHP 236
Query: 567 DGLIFGTGTENS 532
DG G ++S
Sbjct: 237 DGRTLFCGLDDS 248
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+++ + V++WD++ V F GH V S+++S +G Y+A+ ED + +WDL
Sbjct: 512 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 570
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
F++ +++W K +N+ + GH PV S G+Y A+ + D ++W + +
Sbjct: 432 FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDR 491
Query: 377 XKEL 366
+ L
Sbjct: 492 IQPL 495
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+ +WDL + GH V S+S S G LA+ + D VKLWD+ +L
Sbjct: 565 IMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 343 NYAIKELCFDQSGTYLAIAGTD--VRVYLCRQWQELKVFNDHTASATGVRFGKNAQYLAS 170
NY + + F G Y A D R++ + Q L++ H + V + N Y+A+
Sbjct: 460 NYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIAT 516
Query: 169 TSMDRTLKLYGIE 131
S D+T++L+ ++
Sbjct: 517 GSSDKTVRLWDVQ 529
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
GH GPV S + S G ++ +++ D+ ++LW +
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTK 448
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
+IW + + GH+ + + N Y+AT + D V+LWD++
Sbjct: 485 RIWSMDRIQPLRIMAGHL---SDVDWHPNCNYIATGSSDKTVRLWDVQ 529
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 732 HDGPVTGXSLHPTGDYVLSTXSD 664
H GPV + P GD+VLS+ +D
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSAD 439
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+KIWD++++ + + GH V + + +G ++ + ED+ VK+WDL K L
Sbjct: 218 LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 271
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+K+WDL+E V GH S++ G + A+ + D+ +K+WD+RK
Sbjct: 176 IKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VK+WDL + F H G + S+ + + LAT + D VK WDL
Sbjct: 260 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -3
Query: 554 LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKX 375
LV + +V +W + + + + + GH + S++ + +A A +KLWDL +
Sbjct: 125 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEA 184
Query: 374 K 372
K
Sbjct: 185 K 185
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+KIWD++++ + + GH V + + +G ++ + ED+ VK+WDL K L
Sbjct: 125 LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VK+WDL + F H G + S+ + + LAT + D VK WDL
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+K+WDL+E V GH S+ G + A+ + D+ +K+WD+RK
Sbjct: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -3
Query: 554 LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKX 375
LV + +V +W + + + + + GH + S++ + +A A +KLWDL +
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEA 91
Query: 374 K 372
K
Sbjct: 92 K 92
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+KIWD++++ + + GH V + + +G ++ + ED+ VK+WDL K L
Sbjct: 125 LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VK+WDL + F H G + S+ + + LAT + D VK WDL
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+K+WDL+E V GH S+ G + A+ + D+ +K+WD+RK
Sbjct: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -3
Query: 554 LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKX 375
LV + +V +W + + + + + GH + S++ + +A A +KLWDL +
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEA 91
Query: 374 K 372
K
Sbjct: 92 K 92
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+K+WDL+E V F GH +++ G +LA+ + D+ +++WD RK
Sbjct: 31 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 80
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
FL +++WD +++ + + GH +++I S +G ++ + D+ VK+WDL
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 377 XKEL 366
K L
Sbjct: 123 GKLL 126
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VK+WDL + F H GP+ S+ + LAT + D VK WDL
Sbjct: 115 VKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVGRKLCYQRVVFRP 312
GH PV S++ + + A +KLWDL + K + + R C V F P
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNC-SAVEFHP 59
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
VK+W+L+ + GH G + ++++S +G A+ +D + LWDL + K+L +S+
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL--YSLE 232
Query: 347 RKLCYQRVVFRPKRY 303
+ F P RY
Sbjct: 233 AGSIIHSLCFSPNRY 247
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD-LRKXKEL*DHS 354
++++WDL F GH V S++ S + + +A+ D +KLW+ L + K
Sbjct: 86 ELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Query: 353 VGRKLCYQRVVFRPKRYI 300
G K V F P +
Sbjct: 146 DGHKEWVSCVRFSPNTLV 163
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = -1
Query: 343 NYAIKELCFDQSGTYLAIAGT---DVRVYLCRQWQELKVFNDHTASATGVRFGKNAQYLA 173
++ ++++ G + A++G+ ++R++ + + F HT V F + + +
Sbjct: 63 SHFVEDVVLSSDGQF-ALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 172 STSMDRTLKLY 140
S S DRT+KL+
Sbjct: 122 SASRDRTIKLW 132
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
VK+W+L+ GH G + ++++S +G A+ +D + LWDL + K+L +S+
Sbjct: 175 VKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL--YSLE 232
Query: 347 RKLCYQRVVFRPKRY 303
+ F P RY
Sbjct: 233 AGSIIHSLCFSPNRY 247
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD-LRKXKEL*DHS 354
++++WDL + F GH V S++ S + + +A+ D +KLW+ L + K +
Sbjct: 86 ELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEA 145
Query: 353 VGRKLCYQRVVFRPKRYI 300
G K V F P +
Sbjct: 146 DGHKEWVSCVRFSPNTLV 163
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = -1
Query: 343 NYAIKELCFDQSGTYLAIAGT---DVRVYLCRQWQELKVFNDHTASATGVRFGKNAQYLA 173
++ ++++ G + A++G+ ++R++ + + F HT V F + + +
Sbjct: 63 SHFVQDVVLSSDGQF-ALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 172 STSMDRTLKLY 140
S S DRT+KL+
Sbjct: 122 SASRDRTIKLW 132
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+ V++W+ V F GHVGPV +S S + L + ++DS +K+W++R K
Sbjct: 382 KSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK 435
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -3
Query: 539 KTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
K +KIW+++ + + PGH V ++ S +G + + +D +KLW
Sbjct: 422 KDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 551 VLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
V K +IWD+ + ++ GH VT + +G + T ++D +K+W+ + K
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGK 273
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
GH V +S S +G LA+ + D+ V+LWDL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
V++WDL ++ + GH V +++ S +G +L + ++ + W+ +K
Sbjct: 133 VRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKK 182
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 572 IRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSI-SLSENGYYLATAAEDSCVK 396
I+ S L+ Q +K+WD++E GH G V S+ S N L + + D C
Sbjct: 137 IKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFA 196
Query: 395 LWDLR 381
LWDLR
Sbjct: 197 LWDLR 201
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 464 VTSISLSENGYYLATA-AEDSCVKLWDLRKXK 372
+TS+ ++ +ATA A DS +K WD+RK K
Sbjct: 241 ITSVLYVKDEITIATAGAPDSALKFWDIRKLK 272
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/62 (25%), Positives = 36/62 (58%)
Frame = -3
Query: 569 RTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
R+ +++ + VK+W + +A+ GH G +T +++S N ++A+A+ D +++W
Sbjct: 255 RSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVW 314
Query: 389 DL 384
L
Sbjct: 315 RL 316
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSE---NGYYLATAAEDSCVKLWDLR 381
+++W L + V+ GH G VT+I+ S + Y L ++++D ++WD R
Sbjct: 311 IRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDAR 362
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 512 LKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+++ N+ GH V L +G Y+ T ++D VK+W +
Sbjct: 232 VQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSM 274
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+KIWD+ GH+G V +++S Y+ +A +D VK WDL + K
Sbjct: 194 IKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 245
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+QVK WDL++ + ++ GH+ V ++L + T DS ++WD+R ++
Sbjct: 234 KQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQI 289
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 524 KIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WD++ + + P H V S+ + T + DS +K WDLR K +
Sbjct: 279 RVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSM 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
GH+G V S++ + + T + D +K+WD+
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV 199
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLYGI 134
W+ +V H V F + ++ + S DRT+K++ +
Sbjct: 160 WKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV 199
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+QVK WDL++ + ++ GH+ V ++L L T DS ++WD+R ++
Sbjct: 240 KQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQI 295
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+KIWD+ GH+ V +++S Y+ +A +D VK WDL + K
Sbjct: 200 IKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/91 (21%), Positives = 38/91 (41%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
T+ L+ + ++WD++ + + GH V S+ + T + D+ +K WD
Sbjct: 271 TLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Query: 386 LRKXKEL*DHSVGRKLCYQRVVFRPKRYIFS 294
LR K + K + + PK F+
Sbjct: 331 LRYGKTM-STLTHHKKSVRAMTLHPKENAFA 360
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
GH+G V S++ + + T + D +K+WD+
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV 205
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLYGI 134
W+ +V H V F + ++ + S DRT+K++ +
Sbjct: 166 WKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV 205
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = -3
Query: 569 RTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
R+ +++ + VKIW ++ +A+ GH G +T +++S N +A+A+ D +++W
Sbjct: 315 RSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVW 374
Query: 389 DL 384
L
Sbjct: 375 RL 376
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLS---ENGYYLATAAEDSCVKLWDLR 381
+++W L + ++ GH G VT+I+ S + Y L ++++D ++WD R
Sbjct: 371 IRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDAR 422
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -3
Query: 512 LKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+++ N+ GH V +G Y+ T ++D VK+W +
Sbjct: 292 VQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM 334
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLWDL 384
+F+ + QV IW + PGH G V +S S N + LA+A++D +++W L
Sbjct: 502 AFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
Query: 383 RKXKE 369
+ +
Sbjct: 562 DRINQ 566
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 250 QELKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLYGI 134
Q ++ HT ++F N +YLAS+S D+T ++ I
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEI 303
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVA---NFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+L K Q IW++ +++ GH PV +I S + + T + ++ WD
Sbjct: 288 YLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWD 347
Query: 386 L 384
+
Sbjct: 348 V 348
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
H V + S NG YLA++++D +W++
Sbjct: 273 HTDEVWFLQFSHNGKYLASSSKDQTAIIWEI 303
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
++IWD ++ + NF H G VT++ ++ G LA+ ++D+ + LWD+
Sbjct: 88 IRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 572 IRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
+R +L K + VK WD + ++ GH + +++S G +L T + D ++
Sbjct: 633 VRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRR 692
Query: 392 WD 387
WD
Sbjct: 693 WD 694
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
S L K + +WD+ +S + GH VT + + G L ++++D +++WDL
Sbjct: 119 SMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -3
Query: 554 LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKX 375
+V + + +KIW L + H V + N +YL + +D VK WD K
Sbjct: 597 IVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKF 656
Query: 374 KEL 366
+ L
Sbjct: 657 EHL 659
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
VK++ + + GH PV I +S +G + T ++D +K+W L
Sbjct: 564 VKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGL 611
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -3
Query: 554 LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
LV K + +++WDL+ Q + GH V S+ Y+ T + D ++ + +++
Sbjct: 163 LVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKE 221
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 235 FNDHTASATGVRFGKNAQYLASTSMDRTLKLYGI 134
FN H + T +R+ K LAS S D + L+ +
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 524 KIWDLKEQSN-VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WD + S V F GH G V ++ +GY T ++D +L+D+R +L
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 591 LTTAQFHPDGLIFGTGTENST 529
+ T +F PDG FGTG+++ T
Sbjct: 251 VNTVKFFPDGYRFGTGSDDGT 271
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 524 KIWDLKEQSN-VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WD + S V F GH G V ++ +GY T ++D +L+D+R +L
Sbjct: 168 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 221
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 591 LTTAQFHPDGLIFGTGTENST 529
+ T +F PDG FGTG+++ T
Sbjct: 189 VNTVKFFPDGYRFGTGSDDGT 209
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 524 KIWDLKEQSN-VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++WD + S V F GH G V ++ +GY T ++D +L+D+R +L
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 591 LTTAQFHPDGLIFGTGTENST 529
+ T +F PDG FGTG+++ T
Sbjct: 251 VNTVKFFPDGYRFGTGSDDGT 271
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Frame = -3
Query: 590 SQLHNSIRTVS----FLVLERKTQQVKIWDL--------KEQSNVANFPGHVGPVTSISL 447
+QL N + VS FL T VK+W++ KE S V GH VT +
Sbjct: 238 NQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCF 297
Query: 446 SENGYYLATAAEDSCVKLWDL 384
S N + TA++D +++W++
Sbjct: 298 SPNSEQIITASKDGSIRVWNI 318
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+L + VKIW+L GH V S +G YL TA+ D+ +LW +R
Sbjct: 231 YLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Query: 377 XKE 369
KE
Sbjct: 291 GKE 293
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSN---VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
++++DL+ + V NF H V ++ G+ + + +ED VK+WDLR
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLR 114
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
VKIWDL+ + F V PV ++ L N L + ++ +++WDLR
Sbjct: 108 VKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLR 155
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
H + LS YLATA+ D VK+W+L
Sbjct: 216 HNSHILKCLLSPGNKYLATASSDKTVKIWNL 246
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
+++WD++ ++ GH VTS+SLS NG + T+ D+ ++D R
Sbjct: 381 LRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTR 429
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRK 378
+WD+ GH V ++ +S+ + ++ +AA D +KLWDL K
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK 347
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELC--FDQSGTYLAIAGTDVRVYLCRQWQELKVFN---DHTASATG 206
+F + A K +C F G LA AG D +V++ + L+V + +H T
Sbjct: 497 SFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNM-ETLQVESTPEEHAHIITD 555
Query: 205 VRFGKNAQYLASTSMDRTLKLY 140
VRF N+ LA++S D+T+K++
Sbjct: 556 VRFRPNSTQLATSSFDKTIKIW 577
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 590 SQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVAN-FPGHVGPVTSISLSENGYYLATAA 414
+Q+ RT FL + V I+D++ + N F GH V S+ S NG +A+ +
Sbjct: 636 TQVRFQPRTGQFLAAASENT-VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS 694
Query: 413 EDSCVKLWDLRKXKEL*DHS-VGRKLCYQRVVFRP 312
ED+ VKLW L + + S G K + VVF P
Sbjct: 695 EDA-VKLWSLSSGDCIHELSNSGNK--FHSVVFHP 726
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++V IW+++ + H +T + N LAT++ D +K+WD
Sbjct: 530 KKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 578
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
Q +++W+ E + GH +++++ S + +A+A+ D VK+W
Sbjct: 738 QAIELWNTME-NKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELC--FDQSGTYLAIAGTDVRVYLCRQWQELKVFN---DHTASATG 206
+F + A K +C F G LA AG D +V++ + L+V + +H T
Sbjct: 499 SFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNM-ETLQVESTPEEHAHIITD 557
Query: 205 VRFGKNAQYLASTSMDRTLKLY 140
VRF N+ LA++S D+T+K++
Sbjct: 558 VRFRPNSTQLATSSFDKTIKIW 579
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 590 SQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVAN-FPGHVGPVTSISLSENGYYLATAA 414
+Q+ RT FL + V I+D++ + N F GH V S+ S NG +A+ +
Sbjct: 638 TQVRFQPRTGQFLAAASENT-VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS 696
Query: 413 EDSCVKLWDLRKXKEL*DHS-VGRKLCYQRVVFRP 312
ED+ VKLW L + + S G K + VVF P
Sbjct: 697 EDA-VKLWSLSSGDCIHELSNSGNK--FHSVVFHP 728
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++V IW+++ + H +T + N LAT++ D +K+WD
Sbjct: 532 KKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
Q +++W+ E + GH +++++ S + +A+A+ D VK+W
Sbjct: 740 QAIELWNTME-NKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELC--FDQSGTYLAIAGTDVRVYLCRQWQELKVFN---DHTASATG 206
+F + A K +C F G LA AG D +V++ + L+V + +H T
Sbjct: 499 SFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNM-ETLQVESTPEEHAHIITD 557
Query: 205 VRFGKNAQYLASTSMDRTLKLY 140
VRF N+ LA++S D+T+K++
Sbjct: 558 VRFRPNSTQLATSSFDKTIKIW 579
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 590 SQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVAN-FPGHVGPVTSISLSENGYYLATAA 414
+Q+ RT FL + V I+D++ + N F GH V S+ S NG +A+ +
Sbjct: 638 TQVRFQPRTGQFLAAASENT-VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS 696
Query: 413 EDSCVKLWDLRKXKEL*DHS-VGRKLCYQRVVFRP 312
ED+ VKLW L + + S G K + VVF P
Sbjct: 697 EDA-VKLWSLSSGDCIHELSNSGNK--FHSVVFHP 728
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++V IW+++ + H +T + N LAT++ D +K+WD
Sbjct: 532 KKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
Q +++W+ E + GH +++++ S + +A+A+ D VK+W
Sbjct: 740 QAIELWNTME-NKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELC--FDQSGTYLAIAGTDVRVYLCRQWQELKVFN---DHTASATG 206
+F + A K +C F G LA AG D +V++ + L+V + +H T
Sbjct: 499 SFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNM-ETLQVESTPEEHAHIITD 557
Query: 205 VRFGKNAQYLASTSMDRTLKLY 140
VRF N+ LA++S D+T+K++
Sbjct: 558 VRFRPNSTQLATSSFDKTIKIW 579
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 590 SQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVAN-FPGHVGPVTSISLSENGYYLATAA 414
+Q+ RT FL + V I+D++ + N F GH V S+ S NG +A+ +
Sbjct: 638 TQVRFQPRTGQFLAAASENT-VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS 696
Query: 413 EDSCVKLWDLRKXKEL*DHS-VGRKLCYQRVVFRP 312
ED+ VKLW L + + S G K + VVF P
Sbjct: 697 EDA-VKLWSLSSGDCIHELSNSGNK--FHSVVFHP 728
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++V IW+++ + H +T + N LAT++ D +K+WD
Sbjct: 532 KKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
Q +++W+ E + GH +++++ S + +A+A+ D VK+W
Sbjct: 740 QAIELWNTME-NKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELC--FDQSGTYLAIAGTDVRVYLCRQWQELKVFN---DHTASATG 206
+F + A K +C F G LA AG D +V++ + L+V + +H T
Sbjct: 499 SFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNM-ETLQVESTPEEHAHIITD 557
Query: 205 VRFGKNAQYLASTSMDRTLKLY 140
VRF N+ LA++S D+T+K++
Sbjct: 558 VRFRPNSTQLATSSFDKTIKIW 579
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -3
Query: 590 SQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVAN-FPGHVGPVTSISLSENGYYLATAA 414
+Q+ RT FL + V I+D++ + N F GH V S+ S NG +A+ +
Sbjct: 638 TQVRFQPRTGQFLAAASENT-VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS 696
Query: 413 EDSCVKLWDLRKXKEL*DHS-VGRKLCYQRVVFRP 312
ED+ VKLW L + + S G K + VVF P
Sbjct: 697 EDA-VKLWSLSSGDCIHELSNSGNK--FHSVVFHP 728
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++V IW+++ + H +T + N LAT++ D +K+WD
Sbjct: 532 KKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
Q +++W+ E + GH +++++ S + +A+A+ D VK+W
Sbjct: 740 QAIELWNTME-NKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = -1
Query: 289 AGTDVRVYLCRQWQELKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
AGT V + + ++ LK HTA+ + V+F + LAS S+D+T+ L+
Sbjct: 21 AGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW 70
Score = 37.1 bits (82), Expect = 0.014
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
+W S + + GH ++ ++ S + +Y +A++D +++WD R E
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE 119
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -3
Query: 485 FPGHVGPV---TSISLSENGYYLATAAEDSCVKLWDLR 381
+ GH V TS NG Y+ + +ED+CV LWDL+
Sbjct: 251 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = -1
Query: 370 NFKTIQLEENYA--IKELCFDQSGTYLAIAGTD--VRVYLCRQWQE-LKVFNDHTASATG 206
N+ I E ++ I +L + Y A D +R++ R E LKV HT
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 205 VRFGKNAQYLASTSMDRTLKLYGIE 131
V F + + S S D T++++ ++
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVK 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 509 KEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
K ++ GH ++ + S +G LA+A+ D + LW
Sbjct: 31 KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW 70
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -3
Query: 539 KTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
K Q+ +WD + ++ + GH V ++ S + LAT A+D+ VK+W++
Sbjct: 327 KLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV 378
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+VK+W++ + F H VT++ + + L +A+ D V+ WD ++ K
Sbjct: 372 KVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYK 424
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
++ +W K GH PV + S LA+++ D V+LWD+
Sbjct: 458 EIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 506
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -3
Query: 539 KTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
K Q+ +WD + ++ + GH V ++ S + LAT A+D+ VK+W++
Sbjct: 367 KLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV 418
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+VK+W++ + F H VT++ + + L +A+ D V+ WD ++ K
Sbjct: 412 KVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYK 464
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
++ +W K GH PV + S LA+++ D V+LWD+
Sbjct: 498 EIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 546
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKE--QSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++V+E+ V +WD S + GPVTSI+ +++G LA ++S V++WD
Sbjct: 122 YIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWD 180
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W +A GH V ++ S +G +A+AA D ++LW++
Sbjct: 353 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 500 SNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
S + + GH V + SE+G LA+ D+ V +WD
Sbjct: 227 SIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWD 264
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
Q +++W++ E + P H G +TS+++S +A+A+ D VKLW
Sbjct: 884 QSLELWNMSENKTMT-LPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
V + D++ Q+ + GH P+ S+ +G +LA+ +ED VK+W L E
Sbjct: 800 VNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSE 851
Score = 34.3 bits (75), Expect = 0.096
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 319 FDQSGTYLAIAGTDVRVYL--CRQWQELKVFNDHTASATGVRFGKNAQYLASTSMDRTLK 146
F G LA AG D + L + +HTA T +RF + LA++S D+T++
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 145 LY 140
++
Sbjct: 719 VW 720
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 575 SIRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVK 396
S+RT V +T + + +L F H G + ++ S +G Y+A+A ED V+
Sbjct: 184 SVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVR 243
Query: 395 LWDL 384
+W +
Sbjct: 244 VWSI 247
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 485 FPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
F GH+G + +S SE GY L+++ D V+LW
Sbjct: 318 FKGHIGEILDLSWSEKGYLLSSSV-DETVRLW 348
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 575 SIRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVK 396
S+RT V +T + + +L F H G + ++ S +G Y+A+A ED V+
Sbjct: 184 SVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVR 243
Query: 395 LWDL 384
+W +
Sbjct: 244 VWSI 247
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 485 FPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
F GH+G + +S SE GY L+++ D V+LW
Sbjct: 318 FKGHIGEILDLSWSEKGYLLSSSV-DETVRLW 348
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 539 KTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
KT + +L V GH G + ++ S +G YLAT ED VK+W
Sbjct: 176 KTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++++D+ V F GH +T + SE+G ++ +++ D +++WD+ K++
Sbjct: 539 IRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI 592
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -1
Query: 355 QLEENYAIKELCFDQSGTYLAIAGTD--VRVYLCRQWQELKVFNDHTASATGVRFGKNAQ 182
Q + ++ ++ + + LA D +R+Y + ++ F HT T + F ++ +
Sbjct: 511 QWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGK 570
Query: 181 YLASTSMDRTLKLYGI 134
++ S+SMD +L+++ +
Sbjct: 571 WVISSSMDGSLRIWDV 586
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+ V+IWD+ + P H PVT++ + +G + +++ D ++WD
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -1
Query: 343 NYAIKELCFDQSGTYLAIAGTD--VRVYLCRQWQE-----LKVFNDHTASATGVRFGKNA 185
N A+ + F G LA A D +R Y + ++ F H + V F +A
Sbjct: 24 NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83
Query: 184 QYLASTSMDRTLKLYGIE 131
+++ S S D+TLKL+ +E
Sbjct: 84 RFIVSASDDKTLKLWDVE 101
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLS---ENGYYLATAAEDSCVKLWD 387
F+++ +++W++ + + GHV IS + NG + + +ED+CV +W+
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 386 LRKXKEL 366
L K L
Sbjct: 272 LNSKKLL 278
Score = 34.3 bits (75), Expect = 0.096
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
V F GH ++ ++ S + ++ +A++D +KLWD+
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDV 100
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
F+V + +K+WD++ S + GH ++ + + + + D V++WD+
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 377 XK 372
K
Sbjct: 145 GK 146
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 241 KVFNDHTASATGVRFGKNAQYLASTSMDRTLKLYGI 134
+ H + + V+F + + LAS S D+T++ Y I
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI 53
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
V +W+L + + GH V +++ +A+ + D V++W +K
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
T + LV + +++WD + S GH V + L G + + + DS ++LWD
Sbjct: 224 TGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWD 283
Query: 386 LRKXKEL*DHSV 351
L + + L ++V
Sbjct: 284 LGQQRCLHTYAV 295
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/61 (21%), Positives = 29/61 (47%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
T F + +++WDL +Q + + H V +++ + + ++ + D C+ L D
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTD 325
Query: 386 L 384
L
Sbjct: 326 L 326
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
T + LV + +++WD + S GH V + L G + + + DS ++LWD
Sbjct: 224 TGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWD 283
Query: 386 LRKXKEL*DHSV 351
L + + L ++V
Sbjct: 284 LGQQRCLHTYAV 295
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/61 (21%), Positives = 29/61 (47%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
T F + +++WDL +Q + + H V +++ + + ++ + D C+ L D
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTD 325
Query: 386 L 384
L
Sbjct: 326 L 326
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+W + + GH G V +S + L T + D KLWD++ KEL
Sbjct: 63 VWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKEL 114
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
+ K +D Q + GH GP+ +++ S +G ++ ED V+L
Sbjct: 298 EAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFP---GHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
++IWD + + GH +TS+ + + + T + D KLWD+R
Sbjct: 199 IRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -3
Query: 527 VKIWDLK----EQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
++IW LK + ++ H +TS+ S +G L + + D +K+WDLR+ KE
Sbjct: 351 IQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKE 407
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/51 (31%), Positives = 33/51 (64%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
Q +++DL+E ++++ H G VT + E+ + L +++ D +++WDLRK
Sbjct: 435 QCRLFDLRENGFISSWRAHDGYVTKLVAPES-HLLVSSSLDKTLRIWDLRK 484
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRKXKEL*DHSV 351
++IWD++E + P H + S ++ + LAT++ D VK+WD+R +
Sbjct: 174 LRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLN 233
Query: 350 GRKLCYQRVVFRPKR 306
G ++V F P R
Sbjct: 234 GHGYAVRKVKFSPHR 248
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 581 HNSIRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPV-TSISLSENGYYLATAAEDS 405
+N R SFL VK+W + ++V F H V ++ ++G A+A+ D
Sbjct: 114 YNPTRRDSFLT-SSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDC 172
Query: 404 CVKLWDLRK 378
+++WD+R+
Sbjct: 173 TLRIWDVRE 181
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -3
Query: 485 FPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+ GH G VTSIS +G ++A+ + D V++W++
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEV 452
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -1
Query: 310 SGTYLAIAGTDVRVYLCRQWQE---LKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
S LA +D + +C +E LK H+ T F N QY+AS+S+D+T++++
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVW 243
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 512 LKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
L+E S + GH VT S N Y+A+++ D +++W+L +
Sbjct: 203 LEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSR 247
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
+QV WD+ + F GH G V ++ +++ + +A D +++WD R
Sbjct: 82 RQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCR 132
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
V WDL + ++ F H VTS+S + T++ D +++W
Sbjct: 252 VFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
GH G V + + +G Y T +D ++LW+
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W S +A GH V ++ S NG +A+AA D ++LW++
Sbjct: 367 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 527 VKIWDLKE--QSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
V +WD S + GPVTSI+ +++G LA ++S V+LWD +++
Sbjct: 145 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQV 200
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 500 SNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
S V + GH V + SE+G LA+ + V +WD R
Sbjct: 240 SIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHR 279
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W S +A GH V ++ S NG +A+AA D ++LW++
Sbjct: 369 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 527 VKIWDLKE--QSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
V +WD S + GPVTSI+ +++G LA ++S V+LWD
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWD 196
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 500 SNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
S V + GH V + SE+G A+ D+ V +WD
Sbjct: 243 SIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWD 280
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+W + + GH G V +S + L T + D KLWD++ KEL
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFP---GHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
++IWD + + GH +TS+ + + + T + D KLWD+R
Sbjct: 172 IRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+W + + GH G V +S + L T + D KLWD++ KEL
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
+ K +D Q + GH GP+ +++ + +G ++ ED V+L
Sbjct: 271 EAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFP---GHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
++IWD + + GH +TS+ + + + T + D KLWD+R
Sbjct: 172 IRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+W + + GH G V +S + L T + D KLWD++ KEL
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
+ K +D Q + GH GP+ +++ + +G ++ ED V+L
Sbjct: 271 EAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFP---GHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
++IWD + + GH +TS+ + + + T + D KLWD+R
Sbjct: 172 IRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
GH PVT ++LS + +L T + DS V LW + K
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHK 2699
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSN-VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHS 354
+VKIWD+ + + GH V I S +G TA D +K WD + + S
Sbjct: 306 KVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFS 365
Query: 353 VGR 345
G+
Sbjct: 366 TGK 368
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/58 (18%), Positives = 29/58 (50%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+ L+ +++ WD+ + H+G V +I+ +N T+++D +++W+
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
V +WD+ + + F PV +IS + +G Y+A+A+ED + + +++ + + H +
Sbjct: 215 VSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQTGRTV--HQIP 272
Query: 347 RKLCYQRVVFRPKRYIFSHS 288
+ V + PK + +++
Sbjct: 273 CRAAMNSVEWNPKYNLLAYA 292
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 485 FPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+ GH V S++ + NG LA+ + D ++W++
Sbjct: 16 YQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = -3
Query: 533 QQVKIWDLK----EQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLWDLRKXK 372
Q +IW+++ ++ GH V + ++ +ATA+ D V+LWD R K
Sbjct: 42 QTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGK 100
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
V + D + ++ + + GH V S+ S +G +AT + D V+LWDL+
Sbjct: 225 VNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+L+ K+WD + +S V GH V+++S + T +ED V++W
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/73 (19%), Positives = 31/73 (42%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
+++++ + F H + +++ Y+ ++++D +KLWD K G
Sbjct: 81 IRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEG 140
Query: 347 RKLCYQRVVFRPK 309
+V F PK
Sbjct: 141 HSHYVMQVTFNPK 153
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELCFDQSGTYLA-----IAGTD---VRVYLCRQWQELKVFNDHTAS 215
N++T + +++ + EL +S ++A +AG D +RVY ++KVF H
Sbjct: 43 NYQTQTMVKSFDVTELPV-RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADY 101
Query: 214 ATGVRFGKNAQYLASTSMDRTLKLYGIE 131
V Y+ S+S D +KL+ E
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFG-KNAQYLASTSMDRTLKLYGI 134
W ++F H+ V F K+ AS S+DRT+K++ +
Sbjct: 132 WLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = -3
Query: 623 DKKSVTFLE*VSQLHNSIRTVSFLVLERKTQQ-----VKIWDLKEQSNVANFPGHVGPVT 459
DK++ LE + + + V L ER VK+WD++ VA +
Sbjct: 925 DKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAIL 984
Query: 458 SISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
S+ ++ LA A D+ +WD+R K++
Sbjct: 985 SLEYDDSTGILAAAGRDTVANIWDIRSGKQM 1015
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 575 SIRTVS-FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCV 399
SIR V L+ ++W + S A H GPV S+ S + T + D +
Sbjct: 1027 SIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLL 1086
Query: 398 KLWD 387
+ W+
Sbjct: 1087 RFWE 1090
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 36.3 bits (80), Expect = 0.024
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
H G VT + + +G YL +A DS ++LWD+ +
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENG-YYLATAAEDSCVKLWDLRK 378
QV++ D+ + GH V S+ S + + L T D ++ WD+R+
Sbjct: 171 QVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLW 390
SF+ + QV IW+LK + GH V +S + +N LA+A++D +++W
Sbjct: 456 SFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.3 bits (75), Expect = 0.096
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLK-EQSNVANFPGHVGPVTSISLSENGY---YLATAAEDSCVKLW 390
F ++ Q++ +WDL E F GH I G ++A+ +EDS V +W
Sbjct: 411 FFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIW 470
Query: 389 DLRKXKEL*DHSVGRKLCYQRVVFRPK 309
+L+ K L + G + V + PK
Sbjct: 471 NLKNTKPL-EVLSGHSMTVNCVSWNPK 496
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = -1
Query: 349 EENYAIKELCFDQSGTYLAIAGTDVRVYL--CRQWQELKVFNDHTASATGVRFG-KNAQY 179
+ Y I+ +++A D +VY+ + + L+V + H+ + V + KN +
Sbjct: 441 QSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRM 500
Query: 178 LASTSMDRTLKLYG 137
LAS S D+T++++G
Sbjct: 501 LASASDDQTIRIWG 514
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVGRKLC 336
H+ + ++ + NG Y+AT+ D V LWD+ K +++ H ++C
Sbjct: 237 HLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERIC 283
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 334 IKELCFDQSGTYLAIAGTDVRVYLCRQWQE--LKVFNDHTASATGVRFGKNAQYLASTSM 161
I+ L F+ SG+ LA AG D + L + ++V H TG+ F N + LAS
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDT 166
Query: 160 DRTLKLYGIE 131
T+ + ++
Sbjct: 167 TGTVLCWELQ 176
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
S L + +K+ + + S V GH GPVT + NG LA+ V W+L+
Sbjct: 117 SLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQ 176
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLW 390
H VTS++LS + LA+ + D CVKL+
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLY 89
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 732 HDGPVTGXSLHPTGDYVLS 676
H GPVTG HP G+ + S
Sbjct: 145 HKGPVTGLDFHPNGELLAS 163
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 35.5 bits (78), Expect = 0.042
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRK 378
Q+ IWDL+ H + +S + N + LATA+ DS V L+DLRK
Sbjct: 242 QLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRK 293
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 35.5 bits (78), Expect = 0.042
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = -1
Query: 376 LKNFKTIQLEENYAIKE---LCFDQS--GTYLAIAGTD--VRVYLCRQWQELKVFNDHTA 218
LK Q +E++ + + LC D S LA D ++++ R ++ F+ H+
Sbjct: 247 LKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQ 306
Query: 217 SATGVRFGKNAQYLASTSMDRTLKLYGIE 131
T + F ++ L STS D+T +++G++
Sbjct: 307 GVTSLSFSRDGSQLLSTSFDQTARIHGLK 335
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
++KIW ++ + F H VTS+S S +G L + + D ++ L+ K L
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLL 340
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
Q +I LK + F GH V + +G + TA+ D VK+WD
Sbjct: 327 QTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Frame = -3
Query: 539 KTQQVKIWDLKEQSNV--ANFPG-----HVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
+ ++VK+ + K+++ A F G H G + ++ S +G YLA+A ED +++W +
Sbjct: 222 RIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVV 281
Query: 380 KXKEL*DHSV 351
+ + +H V
Sbjct: 282 EDERCEEHDV 291
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Frame = -3
Query: 539 KTQQVKIWDLKEQSNV--ANFPG-----HVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
+ ++VK+ + K+++ A F G H G + ++ S +G YLA+A ED +++W +
Sbjct: 222 RIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVV 281
Query: 380 KXKEL*DHSV 351
+ + +H V
Sbjct: 282 EDERCEEHDV 291
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 527 VKIWDLK--EQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
V +WD S + GPVTSI+ + +G ++A +S V+LWD ++L
Sbjct: 162 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQL 217
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W +A GH V ++ S +G +A+AA D ++ W++
Sbjct: 383 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
V + GH V + S +G LA+ D+ V +WD
Sbjct: 259 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 527 VKIWDLK--EQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
V +WD S + GPVTSI+ + +G ++A +S V+LWD ++L
Sbjct: 152 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQL 207
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W +A GH V ++ S +G +A+AA D ++ W++
Sbjct: 373 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
V + GH V + S +G LA+ D+ V +WD
Sbjct: 249 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVGRKLCY 333
VA+ H V I+ S + + +A++DS VK+WD RK ++ D S +L Y
Sbjct: 1074 VAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEK--DISFRSRLTY 1125
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+ V IWD++ + +V FPGH V+ + L + + D VK+W++
Sbjct: 244 RHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 458 SISLSENGYYLATAAEDSCVKLWDLR 381
++++S +G YLAT D V +WD+R
Sbjct: 227 ALAVSSDGRYLATGGVDRHVHIWDVR 252
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
FL+ K Q + + + + F GH G V S L N A+A+ D KLWD
Sbjct: 33 FLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
V+++D + GH GPV + + G A+ +ED +++W
Sbjct: 252 VRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = -3
Query: 638 HRTTSDKKSVTFLE*VSQLHNSIRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVT 459
H + KK+V++++ +S +N + + S +++WD+K+ V F GH
Sbjct: 543 HVFSGHKKAVSYVKFLS--NNELASAS------TDSTLRLWDVKDNLPVRTFRGHTNEKN 594
Query: 458 SISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
+ L+ N YLA +E + V ++ + + H G
Sbjct: 595 FVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFG 631
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSC-VKLWDLRKXKEL*DHSV 351
V +WD+ + ++ + H S+ S + + D C VK+W R+ + + +
Sbjct: 445 VTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDM 504
Query: 350 GRKLC 336
+C
Sbjct: 505 KANIC 509
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQS--NVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
T+ +V +QVK+W + E V GH+ V+S+ + + +ED +++
Sbjct: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRV 274
Query: 392 WDLRK 378
WD K
Sbjct: 275 WDATK 279
Score = 31.5 bits (68), Expect = 0.68
Identities = 8/48 (16%), Positives = 26/48 (54%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++K+W+ K + GH+ + ++ ++ +A++D +++W+
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/49 (20%), Positives = 24/49 (48%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
+++WD + + + F H GPV + + + +D +K+W+ +
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK 81
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -3
Query: 572 IRTVSF------LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAE 411
IRTV F +V Q ++IW+ + ++ ++ GH V S + +A+
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 410 DSCVKLWDLRKXKE 369
D V++WD+ K+
Sbjct: 156 DQTVRVWDIGALKK 169
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLWDLR 381
+WDL+ +V ++ H + SI + +N + +AT++ D LWDLR
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLR 379
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 566 TVSFLVLERKTQQVKIWDLKEQS--NVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
T+ +V +QVK+W + E V GH+ V+S+ + + +ED +++
Sbjct: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRV 274
Query: 392 WDLRK 378
WD K
Sbjct: 275 WDATK 279
Score = 31.1 bits (67), Expect = 0.90
Identities = 10/52 (19%), Positives = 25/52 (48%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+++WD + + + F H GPV + + + +D +K+W+ + +
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHR 84
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/48 (16%), Positives = 26/48 (54%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
++K+W+ K + GH+ + ++ ++ +A++D +++W+
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = -3
Query: 572 IRTVSF------LVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAE 411
IRTV F +V Q ++IW+ + ++ V+ GH V S + +A+
Sbjct: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 410 DSCVKLWDL 384
D V++WD+
Sbjct: 156 DQTVRVWDI 164
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = -3
Query: 533 QQVKIWDLKEQSN--VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+++K+W+ K++ + VA H+ V ++++SE+G L + A D + +W+
Sbjct: 256 KKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 34.7 bits (76), Expect = 0.073
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 485 FPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
F H G + + S +G YLA+A ED V++W++
Sbjct: 253 FSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 34.7 bits (76), Expect = 0.073
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W S +A GH V +++S +G + T A D ++ W++
Sbjct: 446 QIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHS 354
+Q K+W L H GP+ +++ LAT + D +K WD R+ +
Sbjct: 94 KQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQ 153
Query: 353 VGRKLCYQRVVFRP 312
+ K CY V P
Sbjct: 154 LPDK-CYTLSVKHP 166
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVGRK 342
+ F GH G V S SL +N A+A+ D K+W+ EL HS K
Sbjct: 49 IGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDEL--HSFEHK 97
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -3
Query: 518 WDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+D + + GH GPV + + G + +ED V++W
Sbjct: 250 FDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 527 VKIWDLKEQSN--VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
V +WD S + GPVTSI+ +++G LA ++S V+LWD
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWD 162
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W +A GH V ++ S +G +A+AA D ++LW++
Sbjct: 336 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 500 SNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
S V + GH V + SE+G LA+ D+ V +WD R
Sbjct: 209 SIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHR 248
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W S VA GH V ++ S +G + T A D ++ W++
Sbjct: 409 QIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAA---EDSCVKLWDLRKXKEL*D 360
Q+ +W+ Q + H V +I+ S + L + D C++ W+ +L
Sbjct: 321 QLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNS 380
Query: 359 HSVGRKLC 336
G ++C
Sbjct: 381 IDTGSQVC 388
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -3
Query: 524 KIWDLK----EQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
K+WD + GH+ VT I +G Y + +D +KLWD+RK
Sbjct: 297 KVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRK 349
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+L+ K+WD + +S V GH V+++ + T +ED V++W
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
+++++ V F H + +++ Y+ ++++D +KLWD G
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEG 140
Query: 347 RKLCYQRVVFRPK 309
+VVF PK
Sbjct: 141 HSHYVMQVVFNPK 153
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELCFDQSGTYL-----AIAGTD---VRVYLCRQWQELKVFNDHTAS 215
N++T + +++ + EL +S ++ +AG D +RVY ++KVF H+
Sbjct: 43 NYQTQTITKSFEVTELPV-RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDY 101
Query: 214 ATGVRFGKNAQYLASTSMDRTLKLYGIE 131
V Y+ S+S D +KL+ E
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFG-KNAQYLASTSMDRTLKLYGI 134
W ++F H+ V F K+ AS S+DRT+K++ +
Sbjct: 132 WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+L+ K+WD + +S V GH V+++ + T +ED V++W
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
+++++ V F H + +++ Y+ ++++D +KLWD G
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEG 140
Query: 347 RKLCYQRVVFRPK 309
+VVF PK
Sbjct: 141 HSHYVMQVVFNPK 153
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELCFDQSGTYL-----AIAGTD---VRVYLCRQWQELKVFNDHTAS 215
N++T + +++ + EL +S ++ +AG D +RVY ++KVF H+
Sbjct: 43 NYQTQTITKSFEVTELPV-RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDY 101
Query: 214 ATGVRFGKNAQYLASTSMDRTLKLYGIE 131
V Y+ S+S D +KL+ E
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFG-KNAQYLASTSMDRTLKLYGI 134
W ++F H+ V F K+ AS S+DRT+K++ +
Sbjct: 132 WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+L+ K+WD + +S V GH V+++ + T +ED V++W
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
+++++ V F H + +++ Y+ ++++D +KLWD G
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEG 140
Query: 347 RKLCYQRVVFRPK 309
+VVF PK
Sbjct: 141 HSHYVMQVVFNPK 153
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELCFDQSGTYL-----AIAGTD---VRVYLCRQWQELKVFNDHTAS 215
N++T + +++ + EL +S ++ +AG D +RVY ++KVF H+
Sbjct: 43 NYQTQTITKSFEVTELPV-RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDY 101
Query: 214 ATGVRFGKNAQYLASTSMDRTLKLYGIE 131
V Y+ S+S D +KL+ E
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFG-KNAQYLASTSMDRTLKLYGI 134
W ++F H+ V F K+ AS S+DRT+K++ +
Sbjct: 132 WACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+L+ K+WD + +S V GH V+++ + T +ED V++W
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSVG 348
+++++ V F H + +++ Y+ ++++D +KLWD K G
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEG 140
Query: 347 RKLCYQRVVFRPK 309
+V F PK
Sbjct: 141 HSHYVMQVTFNPK 153
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = -1
Query: 370 NFKTIQLEENYAIKELCFDQSGTYLA-----IAGTD---VRVYLCRQWQELKVFNDHTAS 215
N++T + +++ + EL +S ++A +AG D +RVY ++KVF H+
Sbjct: 43 NYQTQVMAKSFEVTELPV-RSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDY 101
Query: 214 ATGVRFGKNAQYLASTSMDRTLKLYGIE 131
V Y+ S+S D +KL+ E
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFG-KNAQYLASTSMDRTLKLYGI 134
W ++F H+ V F K+ AS S+DRT+K++ +
Sbjct: 132 WACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 253 WQELKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
WQ KV + H A+ T V + + +YL S S D+T +++
Sbjct: 405 WQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLW 390
H G + SI S +G YLA+A ED +++W
Sbjct: 362 HKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 458 SISLSENGYYLATAAEDSCVKLWD 387
S SL+ NG +L +A+EDS V +W+
Sbjct: 649 SASLTSNGKFLVSASEDSNVYVWN 672
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 551 VLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENG-YYLATAAEDSCVKLW 390
+L + Q+K ++ + + F GH G V ++ +E+G Y L++A + + +W
Sbjct: 172 ILVTASTQLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
Q+ +W S +A GH V +++S +G + T A D ++ W++
Sbjct: 403 QIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -3
Query: 557 FLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
+L + VKIW++ GH V S +G +L TA+ D +LW +
Sbjct: 225 YLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPA 284
Query: 377 XKEL 366
KE+
Sbjct: 285 GKEV 288
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 527 VKIWDLKEQSN--VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
++++D+ S V + H V ++ + ++ + +ED VK+WDLR
Sbjct: 58 IRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
H G + LS YLATA+ D VK+W++
Sbjct: 210 HNGHILKCLLSPANKYLATASSDKTVKIWNV 240
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
VKIWDL+ + V V ++ L N L + ++ +++WDLR
Sbjct: 102 VKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELISGDQNGNIRVWDLR 149
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSI--SLSENGYYLATAAEDSCVKLW 390
+K+WD + + F GH PV S+ EN ++ + A D +K W
Sbjct: 490 IKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSI--SLSENGYYLATAAEDSCVKLW 390
+K+WD + + F GH PV S+ EN ++ + A D +K W
Sbjct: 490 IKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+ F GH G V S L N A+A+ D KLWD
Sbjct: 54 IGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
V+++D + GH GPV + + G A+ +ED +++W
Sbjct: 252 VRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+ F GH G V S L N A+A+ D KLWD
Sbjct: 54 IGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
V+++D + GH GPV + + G A+ +ED +++W
Sbjct: 252 VRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSEN-GYYLATAAEDSCVKLWDLRK 378
VK+WD+ +++F H S+ SE LA+ ++D VKLW++ +
Sbjct: 778 VKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINE 828
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
H G + SI S +G YLA+A ED + +W +
Sbjct: 412 HNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRK 378
IWD + H V +S + N + LATA+ DS V L+DLRK
Sbjct: 244 IWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRK 292
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
H G VT + + +G YL +A S ++LWD+ +
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGR 345
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENG-YYLATAAEDSCVKLWDLRK 378
QV++ D+ + GH V S+ S + + L T D ++ WD+R+
Sbjct: 171 QVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 470 GPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
G V S++ SE+G +L ++ D V +WDLR K
Sbjct: 375 GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMK 407
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 521 IWD--LKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
+W+ + +V+ GH V S+S + +G LAT D V +W+++ ++
Sbjct: 74 VWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEED 126
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLW 390
GH V SIS + G + T ++D VK+W
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAA-EDSCVKLWDLRKXKEL 366
G G VT + S++G YL T +D + WD+RK E+
Sbjct: 253 GQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEI 291
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -3
Query: 533 QQVKIWDLKEQSN---VANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRK 378
Q + IWDL+ S V + H V ++ + N + +AT + D VKL+DLRK
Sbjct: 250 QYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRK 305
>At5g19850.1 68418.m02358 hydrolase, alpha/beta fold family protein
low similarity to hydrolase [Terrabacter sp. DBF63]
GI:14196240; contains Pfam profile PF00561: hydrolase,
alpha/beta fold family
Length = 359
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 538 FRSSTKNETVRMELCSCETHSRKVTDFLSEVV 633
F+S K ETV+ LC C S +VTD L E +
Sbjct: 235 FKSIAKPETVKSILCQCYHDSSQVTDELVEAI 266
>At4g30510.2 68417.m04332 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 261
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAE 411
V ++++ + + + H P+ +I+LS NG Y+AT +E
Sbjct: 121 VLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSE 159
>At4g30510.1 68417.m04331 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 312
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAE 411
V ++++ + + + H P+ +I+LS NG Y+AT +E
Sbjct: 108 VLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSE 146
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 244 LKVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
L DH S VR+ KN++Y+AS S D+ ++++
Sbjct: 52 LATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIH 86
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 515 DLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
D++ V GH V ++ S + LA+ + D+ V +W++R
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMR 148
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
V IW+++ GH+ V ++ G ++A+ ++D V +W
Sbjct: 142 VHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIW 187
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
++ GH V S+S + +G LAT + D V +W++ + E
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNE 152
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = -1
Query: 397 NYGI*EXLKNFKTIQLEENYAIKELCFDQSGTYLAIAGTDVRVYLCR-----QWQELKVF 233
NYG + T++ EN +K + ++ SG+ LA D V++ ++ V
Sbjct: 103 NYG--SEFECISTLEGHEN-EVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 232 NDHTASATGVRFGKNAQYLASTSMDRTLKLYGIE 131
HT V++ L S S D T+K++ E
Sbjct: 160 TGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSE 193
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFP-GHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
V+ WDL+ V + HV V E + L TA ++S + +WDLRK K
Sbjct: 192 VQFWDLRTMKKVNSIEHAHVRGVDYNPKRE--HILVTAEDESGIHVWDLRKAK 242
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
GH G + ++S S +G + T + D K+WD+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+WD+KE H VT SLSE G + + + D +++W + K K
Sbjct: 888 LWDIKE---------HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGK 928
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSI--SLSENGYYLATAAEDSCVKLW 390
+K+WD F GH PV SI EN ++ + A D +K W
Sbjct: 488 IKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSI--SLSENGYYLATAAEDSCVKLW 390
+K+WD F GH PV SI EN ++ + A D +K W
Sbjct: 488 IKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRK 378
V++WD+ V H V SI S + LA+ ++D VKLW + +
Sbjct: 558 VQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRK 378
V++WD+ V H V SI S + LA+ ++D VKLW + +
Sbjct: 558 VQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+++ L + + F GH V S+SL G + + D V LWD R K
Sbjct: 102 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEK 153
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
+++ L + + F GH V S+SL G + + D V LWD R K
Sbjct: 99 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEK 150
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -1
Query: 334 IKELCFDQSGTYLAIAGTDVRVYL--CRQWQELKVFNDHTASATGVRFGKNAQYLASTSM 161
IK L + GTYL G +YL + LK ++ H S T + F + L S S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 160 DRTLKLYGI 134
D +++++ +
Sbjct: 141 DGSIRVWSL 149
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/48 (20%), Positives = 24/48 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+ +W++ + + GH VT + S + L + ++D +++W L
Sbjct: 102 IYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -1
Query: 322 CFDQSGTYLAIAGTDVRVYLCRQWQELKVFNDHTASATG----VRFGKNAQYLASTSMDR 155
CF++ G + I + + + ++ ++V +AS + F +N QYL + S DR
Sbjct: 180 CFNKCGDLVYIGNSKGEILIV-DYKSVRVLALVSASGAAPVKNIVFSRNGQYLLTNSHDR 238
Query: 154 TLKLY 140
T+++Y
Sbjct: 239 TIRIY 243
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 464 VTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+TS+S S+ G+ L +A D + LWD+ +++
Sbjct: 70 ITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKI 102
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
+W + A PGH V+ ++ S +G LA+ D V+++D
Sbjct: 97 LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 572 IRTVSFLVLERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKL 393
I T +L V IWD + V + GH V +IS+S N ++ + + D+ ++
Sbjct: 337 IGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARV 396
Query: 392 WD 387
++
Sbjct: 397 FE 398
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
IWDL + S H VTS++ YLAT + V +WD
Sbjct: 313 IWDL-QHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
+++ GH + + NG LAT +D+ +LWD+R E
Sbjct: 283 ISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSE 324
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSI--SLSENGYYLATAAEDSCVKLW 390
+K+WD F GH PV S+ EN ++ + A D +K W
Sbjct: 488 IKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSI--SLSENGYYLATAAEDSCVKLW 390
+K+WD F GH PV S+ EN ++ + A D +K W
Sbjct: 488 IKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Frame = -3
Query: 668 QTNTGVXRHSHRTTSDKKSVTF--LE*VSQLHNSIRTVSFLVLERKTQQVKIWDLKEQSN 495
+ ++ V SH T+ SVTF + ++ +H + FL ++ V ++D+ +
Sbjct: 519 KASSTVTTSSHSTSG---SVTFDEFDQLTSVHANSTDQLFLA-SGYSKDVALYDIGRGTR 574
Query: 494 VANFPG-HVGPVTSISLSENGYYL-ATAAEDSCVKLWDLRK 378
+ F H + + S + +L AT++ D VKLWDLR+
Sbjct: 575 LQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQ 615
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 539 KTQQVKIWDLKEQ-SNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWD 387
K + + W + S + GH VT I+L L TA++D V++WD
Sbjct: 121 KCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWD 172
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 458 SISLSENGYYLATAAEDSCVKLWDLR 381
++++S +G YLAT D V LWD+R
Sbjct: 211 ALAVSSDGRYLATGGVDCHVHLWDIR 236
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
H G V +I S++ +YLA+ D + +W++++
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWEVQE 435
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -3
Query: 515 DLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
D + GH+ + + NG AT +D ++WD RK E
Sbjct: 305 DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSE 353
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -3
Query: 515 DLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
D + GH+ + + NG AT +D ++WD RK E
Sbjct: 299 DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSE 347
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKE 369
GH+ S + NG LAT +D+ +LWD+R +
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQ 353
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
+K+WDL H+G VTS+ + L +++ D +KLW + + L
Sbjct: 334 IKVWDLNTLQCRMTLKQHIGTVTSLLCWDK--CLISSSLDGTIKLWACSENESL 385
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
VKIWD +++S F H ++ ++ + + L + D + + +LR K
Sbjct: 60 VKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 111
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
VKIWD +++S F H ++ ++ + + L + D + + +LR K
Sbjct: 117 VKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 168
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 494 VANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
V++ GH G V + +G LA+ D VKLW
Sbjct: 273 VSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 509 KEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHS 354
+E V VG S+S +++G LAT AED +++++ K L + S
Sbjct: 130 EESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNES 181
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 509 KEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHS 354
+E V VG S+S +++G LAT AED +++++ K L + S
Sbjct: 130 EESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNES 181
>At5g38037.1 68418.m04583 hypothetical protein
Length = 226
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 604 FWSESHNCTIPSGRSHFWYWNGKLNK*RF 518
FW E+H T +G+S + + GK+ RF
Sbjct: 70 FWRENHGFTFLAGKSRIFRFGGKITDFRF 98
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -3
Query: 512 LKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL*DHSV 351
++ S GH G V +++ + NG L + ++D + +W+ K L HS+
Sbjct: 37 VRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLL--HSI 88
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 533 QQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAA 414
Q VKIWDL+ + + GH +T + + +LA+ +
Sbjct: 115 QIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 334 IKELCFDQSGT-YLAIAGTD--VRVYLCRQWQELKVFNDHTASATGVRFGKNAQYLASTS 164
+ + F + G+ Y+ GT V+++ ++ +K HT++ TGV + ++LAS S
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Query: 163 MDRTLKLYGI 134
+ L ++ +
Sbjct: 155 VGGDLIVHNL 164
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 506 EQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRKXKE 369
E + V + H GPV + + + LA+ A+D + +WDL K E
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSE 157
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Frame = -3
Query: 563 VSFLVLERKTQQVK----------IWDLKEQSNVANFPGHVGPVTSI---SLSENGYYLA 423
+SF+ RK QQ+ IWDL++Q + NF V S+ + + +
Sbjct: 175 ISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMV 234
Query: 422 TAAEDS--CVKLWDLR 381
+ +DS +KLWD+R
Sbjct: 235 ASDDDSSPTLKLWDMR 250
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 506 EQSNVANFPGHVGPVTSISLSE-NGYYLATAAEDSCVKLWDLRKXKE 369
E + V + H GPV + + + LA+ A+D + +WDL K E
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSE 157
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Frame = -3
Query: 563 VSFLVLERKTQQVK----------IWDLKEQSNVANFPGHVGPVTSI---SLSENGYYLA 423
+SF+ RK QQ+ IWDL++Q + NF V S+ + + +
Sbjct: 175 ISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMV 234
Query: 422 TAAEDS--CVKLWDLR 381
+ +DS +KLWD+R
Sbjct: 235 ASDDDSSPTLKLWDMR 250
>At3g50160.1 68416.m05483 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 511
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 331 KELCFDQSGTYLAIAGTDVRVYLCRQWQELKVFNDH 224
KE+ FD + YL+ +V +Y R+W LK H
Sbjct: 428 KEVIFDPNDGYLSALTGEVNIYYRRKWNYLKATLRH 463
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 521 IWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
IWD+K S N + SE G T +ED ++LWDL
Sbjct: 299 IWDIKNLS-CGNMHSPTAACVARGCSE-GVSFTTCSEDGTIRLWDL 342
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = -3
Query: 518 WDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
WD++ F GH + ++ + + T +ED ++WD + K
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGK 234
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 500 SNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXKEL 366
S + ++P H+ P+T+++ S G A+ D + L+DL L
Sbjct: 32 SPLFSYPSHISPITTVACS--GPAAASGGSDDTIHLYDLPSASSL 74
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -3
Query: 548 LERKTQQVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLR 381
LE + ++ + + + F GH V S+ +S + + D V+LWDLR
Sbjct: 89 LESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLR 144
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = -3
Query: 515 DLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRK 378
DL H G + ++ S + + LA+A ED + +W++++
Sbjct: 397 DLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = -3
Query: 530 QVKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
++++++ ++ + +A H ++S S + +A+A+ED+ V LW L
Sbjct: 331 RIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWKL 379
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 479 GHVGPVTSISLSENG-YYLATAAEDSCVKLWDL 384
GH TS+S + + LAT ++D VKLWDL
Sbjct: 367 GHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
>At3g50150.1 68416.m05482 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function; expression
supported by MPSS
Length = 509
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 343 NYAIKELCFDQSGTYLAIAGTDVRVYLCRQWQELK 239
N KE+ FD YL+ +V Y R+W LK
Sbjct: 432 NRLCKEVIFDPKDGYLSQLSREVNRYYSRKWNSLK 466
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 476 HVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
H+G VT I+ T ++D VKLWD + K
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAK 2408
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Frame = -3
Query: 527 VKIW--DLKEQSNVANFPGHVGPVTSIS--------LSENGYYLATAAEDSCVKLWDL 384
V++W K+ S +A GH+GPV ++ E Y++ + DS VK+W +
Sbjct: 327 VRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLW 390
+K+WDL + H G VTS+ + L +++ D +K+W
Sbjct: 280 IKMWDLNTLQCIMTLKQHTGTVTSLLCWDK--CLISSSLDGTIKVW 323
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 479 GHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
GH GP+TS++L + + + D V++WD K
Sbjct: 255 GHEGPITSLALDMTSIF--SGSWDMSVRIWDRSSMK 288
>At5g14130.1 68418.m01653 peroxidase, putative identical to
peroxidase ATP20a [Arabidopsis thaliana]
gi|1546694|emb|CAA67338
Length = 330
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 238 VFNDHTASATGVRFGKNAQ--YLASTSMDRTLKLYGIE 131
+FND ++ AT VRF NA+ Y A +S R L G++
Sbjct: 278 LFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVK 315
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = -3
Query: 560 SFLVLERKTQQVKIWDLKEQSNVANFP--GHVGPVTSISLS---ENGYYLATAAEDSCVK 396
+F+ + ++IWDL + V G + T L+ EN +A+ +ED VK
Sbjct: 181 NFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVK 240
Query: 395 LWDLRKXK 372
+WD+ K
Sbjct: 241 VWDVATGK 248
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -3
Query: 551 VLERKTQQVKIWDLKEQSNVANF--PGHVGPVTSISLSENG-YYLATAAEDSCVKLWDL 384
V+ K VK +D + +F H V+SIS + + LAT + D VKLWDL
Sbjct: 317 VVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDL 375
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 527 VKIWDLKE-QSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDLRKXK 372
++ WDL+ + N + HV V +L + L +A ++S + LWDLRK K
Sbjct: 192 IQFWDLRTMKKNNSIERAHVRNV-DYNLKRE-HILVSADDESGIHLWDLRKTK 242
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 506 EQSNVANFPGHVGPVTSISLS-ENGYYLATAAEDSCVKLWDL 384
E ++V + H GPV + + ++ LA+ A+D V +WDL
Sbjct: 104 EIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 241 KVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
++ + H GV + A+Y+AS S DRT ++Y
Sbjct: 89 QILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 241 KVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
++ + H GV + A+Y+AS S DRT ++Y
Sbjct: 148 QILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 241 KVFNDHTASATGVRFGKNAQYLASTSMDRTLKLY 140
++ + H GV + A+Y+AS S DRT ++Y
Sbjct: 148 QILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 464 VTSISLSENGYYLATAAEDSCVKLW 390
+TS SL+ +G ++ +A EDS V +W
Sbjct: 506 LTSASLTSDGKHIVSACEDSNVYIW 530
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
V IWDL S V P PVT + +++ + TAA S + +W +
Sbjct: 3348 VIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAA-GSVLAVWSI 3394
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 343 NYAIKELCFDQSGTYLAIAGTDVRVYLCRQWQELKVFNDH 224
N +E+ FD TYL+ V Y R+W LK H
Sbjct: 431 NRLCQEVAFDLENTYLSELSNKVDRYYNRKWNVLKATLKH 470
>At3g20620.1 68416.m02609 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain; similar to F-box protein family, AtFBX8
(GI:20197464) [Arabidopsis thaliana]
Length = 391
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 241 KVFNDHTASATGVRFGKNAQYLASTSMDRTLKLYGIE 131
K + H A GKN+ + SM +T+KLY ++
Sbjct: 33 KTVSKHLAKLQLAESGKNSSLVVCPSMGKTMKLYSMD 69
>At2g30360.1 68415.m03695 CBL-interacting protein kinase 11 (CIPK11)
identical to CBL-interacting protein kinase 11
[Arabidopsis thaliana] gi|13249121|gb|AAK16686; contains
Pfam profiles PF00069: Protein kinase domain and
PF03822: NAF domain; identical to cDNA CBL-interacting
protein kinase 11 (CIPK11)partial cds GI:13249120
Length = 435
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = -2
Query: 618 KVSDFSGVSLTTAQFHPDGLIFG-TGTENSTSEDL----GFKGAK 499
KVSDF G+S T Q PDGL+ GT + ++ G++GAK
Sbjct: 160 KVSDF-GLSALTDQIRPDGLLHTLCGTPAYVAPEILSKKGYEGAK 203
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 527 VKIWDLKEQSNVANFPGHVGPVTSISLSENGYYLATAAEDSCVKLWDL 384
+K W L++ S + GH V+++ + NG L + + D V+LW L
Sbjct: 609 IKAWSLQDGSLLCTMSGHKSVVSTL-VVVNG-VLYSGSWDGTVRLWSL 654
>At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat;
similar to ESTs gb|R30192 and gb|AA651017
Length = 913
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 237 CSMITLLRPPVSGS---ERTHSISLPPAWTGRSNFTG*NKNRYKF 112
C+ T R P+S S +R H+ISL PA TG N++ K+
Sbjct: 11 CTTTTTTRSPLSISFLHQRIHNISLSPANEDPETTTGNNQDSEKY 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,137,023
Number of Sequences: 28952
Number of extensions: 339374
Number of successful extensions: 1519
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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