Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_L12
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.23 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -1

Query: 250 ASGQIP--QISAQGVGMNGPMGQA-PLVMPNGMMLPGAQHQYMGPPPWGKDDKDKAS 89
           A+G IP    S  G+   G  G A P    NG  L      +MG PP+  D K   S
Sbjct: 100 AAGPIPVSMASKMGLAPTGHPGAALPFFCHNGDPLSQPPPAHMGIPPYQLDSKTAGS 156


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = -1

Query: 226 SAQGVGMNGPMGQA-PLVMPNGMMLPGAQHQYMGPPPWGKDDKDKAS 89
           S  G+   G  G A P    NG  L      +MG PP+  D K   S
Sbjct: 2   SKMGLAPTGHPGAALPFFCHNGDPLSQPPPAHMGIPPYQLDSKTAGS 48


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 127 PPPWGKDDKDKASESVVGSMTDNDEMPPGEAVP 29
           PPP  +DD     ++   +   N  +PPG A+P
Sbjct: 215 PPPPEEDDDSNIPQNNPKNKQHNFNLPPG-AIP 246


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 376 PPILQGFIPXGRHTRWS 426
           PP L+G +  GRH  +S
Sbjct: 65  PPDLEGILDLGRHENFS 81


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = +3

Query: 18   AAVQGTA---SPGGISSLSVI--LPTTDSEALSLSSFPQGGGPMYWCCAPGSIMPLGITS 182
            A + GTA      G+ S S I  +  T S  ++    PQ     +WC  PG I  L I S
Sbjct: 986  AVIVGTALQLREDGVGSPSAIFLIAMTGSFFIAACLHPQE----FWCIVPGIIYLLSIPS 1041


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = +3

Query: 18   AAVQGTA---SPGGISSLSVI--LPTTDSEALSLSSFPQGGGPMYWCCAPGSIMPLGITS 182
            A + GTA      G+ S S I  +  T S  ++    PQ     +WC  PG I  L I S
Sbjct: 986  AVIVGTALQLREDGVGSPSAIFLIAMTGSFFIAACLHPQE----FWCIVPGIIYLLSIPS 1041


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = +3

Query: 18   AAVQGTA---SPGGISSLSVI--LPTTDSEALSLSSFPQGGGPMYWCCAPGSIMPLGITS 182
            A + GTA      G+ S S I  +  T S  ++    PQ     +WC  PG I  L I S
Sbjct: 986  AVIVGTALQLREDGVGSPSAIFLIAMTGSFFIAACLHPQE----FWCIVPGIIYLLSIPS 1041


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = +3

Query: 18   AAVQGTA---SPGGISSLSVI--LPTTDSEALSLSSFPQGGGPMYWCCAPGSIMPLGITS 182
            A + GTA      G+ S S I  +  T S  ++    PQ     +WC  PG I  L I S
Sbjct: 986  AVIVGTALQLREDGVGSPSAIFLIAMTGSFFIAACLHPQE----FWCIVPGIIYLLSIPS 1041


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,864
Number of Sequences: 336
Number of extensions: 4090
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)