Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L12
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 36 0.028
04_04_1165 + 31423674-31423881,31424073-31424200,31424996-314251... 32 0.61
05_01_0277 + 2152679-2153038 31 1.1
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169 30 2.5
03_06_0019 - 31078669-31080081 30 2.5
01_06_1796 - 39932487-39932633,39933150-39933201,39933370-399334... 30 2.5
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 29 5.7
01_07_0176 - 41733845-41734834,41736058-41736588 29 5.7
05_05_0342 - 24231924-24232178,24232271-24232653,24232778-24232790 28 7.5
01_01_0608 - 4513604-4513701,4513790-4513919,4514027-4514116,451... 28 7.5
12_02_1237 + 27245411-27245842 28 9.9
11_01_0316 + 2361904-2362237,2362454-2363178 28 9.9
05_06_0043 + 25143513-25143866,25144010-25144191,25144284-251443... 28 9.9
04_03_0827 - 20108937-20109046,20109146-20109234,20109400-201095... 28 9.9
03_04_0055 + 16891212-16891848,16893166-16893206 28 9.9
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 36.3 bits (80), Expect = 0.028
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -1
Query: 382 WVETKTDEGKSYYYHARSRETTWTRPVE 299
W E + +GK YYY+ ++R+++W +P E
Sbjct: 111 WQEHTSADGKKYYYNKKTRQSSWEKPAE 138
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 382 WVETKTDEGKSYYYHARSRETTWTRPVE 299
W E T EG+ YYY+ ++++ WT P E
Sbjct: 152 WKEFTTQEGRKYYYNKVTKQSKWTIPDE 179
>04_04_1165 +
31423674-31423881,31424073-31424200,31424996-31425100,
31425350-31425442,31425904-31425978,31426284-31426346,
31426537-31426646,31426810-31426817,31426831-31426997
Length = 318
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 538 PASQHDVSAALRPPSRHDASRGADGSPS*YDESAPIWR 425
PA H +S LRPP+ A+ +GSPS ++S + R
Sbjct: 36 PARPHGLSLHLRPPAMASAAAAGNGSPSAPEDSTALSR 73
>05_01_0277 + 2152679-2153038
Length = 119
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 607 RTGRTPFRT*WTEFRQQLGTDGSPASQHDVSAALRPPSRHDASRGADGSPS 455
RT +PFR T QQ +H + P RH +S A G+PS
Sbjct: 6 RTITSPFRKARTILNQQATNTSGSIDEHHHRHRAKKPRRHSSSSSAAGTPS 56
>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
Length = 515
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 745 SGPWELQKPXSRPPAWLDERSA 680
S PWEL K + P WLD+ S+
Sbjct: 239 SSPWELTKTANLPNQWLDDESS 260
>03_06_0019 - 31078669-31080081
Length = 470
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 87 SEALSLSSFPQGGGPMYWCCAPGSIMPLG-ITSGAWPMGPFMP 212
+EA++ +SF + + PG ++P+G + SG P+G F P
Sbjct: 221 AEAIACNSFEELESGAFAVDVPGRVLPVGPLASGGKPVGGFWP 263
>01_06_1796 -
39932487-39932633,39933150-39933201,39933370-39933495,
39933645-39933743,39934039-39934258,39934599-39934764,
39935108-39935161,39935527-39935657,39935747-39935818,
39936524-39936602,39936705-39936783,39936868-39936902,
39936986-39937111
Length = 461
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 391 PEVWVETKTD-EGKSYYYHARSRETTWTRP 305
P WVE K G SY+Y+ + T W RP
Sbjct: 189 PPGWVEAKDPTSGASYFYNQSTGTTQWDRP 218
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 439 APIWRTTWYAAPLV*XPEVWVET-KTDEGKSYYYHARSRETTWTRP 305
AP+ A P PE W E G+ YYY+ ++ T W P
Sbjct: 220 APLNTMQHQAPPSSSLPENWEEALDQSTGQKYYYNTNTQATQWEPP 265
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 382 WVETKTDEGKSYYYHARSRETTWTRPVE 299
W T +GK YYY + + ++W P E
Sbjct: 494 WSIVTTSDGKKYYYDNKLKVSSWQLPPE 521
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 6 FFFFAAVQGTASPGGISSLSVILPTTDSEALSLSSFPQGGGPMYWCCA---PGSIMPLGI 176
FF AA A+P G L + P + S S SS P+G G A PG+++P+
Sbjct: 51 FFCGAAADQAAAPPGALLLDHLSPRSPSGGASASS-PRGAGGSAAAAAAATPGAVIPVSS 109
Query: 177 TS 182
S
Sbjct: 110 VS 111
>05_05_0342 - 24231924-24232178,24232271-24232653,24232778-24232790
Length = 216
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 145 QHQYMGPPPWGKDDKDKASESVVGSMTDNDEMPPGEAVPWTAAKKK 8
+ Q MG W +D +V + D+D++ PG+ TAA K
Sbjct: 13 EEQSMGKRLWEDEDAGDDFAAVKDTWDDDDDVKPGKETAATAASTK 58
>01_01_0608 -
4513604-4513701,4513790-4513919,4514027-4514116,
4514225-4514330,4514442-4514542,4514678-4514773,
4514860-4514959,4515133-4515269,4515563-4515661,
4515740-4515937,4516058-4516235,4516635-4516690,
4516781-4516933,4517248-4517340,4517422-4517523,
4517609-4517650,4517812-4517855,4518087-4518186,
4518323-4518394,4518499-4518621,4519309-4519452
Length = 753
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 121 PWG-----KDDKDKASESVVGSMTDNDEMPPGEAVPWTAAKKKKK 2
PWG KD+ DK ++G TD D + P + AAK ++K
Sbjct: 167 PWGDAKATKDEIDKKLAEILGPKTDADNVKPVKKKKEKAAKVEEK 211
>12_02_1237 + 27245411-27245842
Length = 143
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Frame = -1
Query: 265 MEILVASGQIPQISAQGVGMNGPMGQAPLV----MPNGMMLPGAQHQYMG-PPPWGKDDK 101
+ +L +G I +A P GQAP +P G +PG + Y G P W
Sbjct: 13 VSVLFTAGIIASAAAARDLTADPAGQAPPAYDFGIPAGFFVPGTNNPYNGDPAAWAAGYG 72
Query: 100 DKASESVVGSMTDNDEMP 47
A+ V G E P
Sbjct: 73 SAAAGDVGGFGNGGAEAP 90
>11_01_0316 + 2361904-2362237,2362454-2363178
Length = 352
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 127 PPPWGKDDKDKASESVVGSMTDNDEMPPGEAVPWTAAKKKKK 2
P P GK K + E+ + E PPG+ P K +KK
Sbjct: 28 PKPAGKGGKPEKGETPGKGKPEERETPPGKGKPEEKEKPEKK 69
>05_06_0043 +
25143513-25143866,25144010-25144191,25144284-25144374,
25144452-25144568,25144922-25144976,25145008-25145093,
25145190-25145300,25145564-25145608,25145695-25145740,
25146078-25146152,25146902-25146971,25147128-25147437,
25147778-25147851,25147996-25148151,25148416-25148539
Length = 631
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 742 GPWELQKPXSRPPAWLDERSAAAYAISWTRLR 647
GP+ + P +R PAWL +R AA + RLR
Sbjct: 67 GPYTGRDPAARKPAWLRQR--AAQGEKYARLR 96
>04_03_0827 -
20108937-20109046,20109146-20109234,20109400-20109548,
20109801-20109942,20110530-20110645,20111141-20111458
Length = 307
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 644 PQDLQCADEASSEDGADPVSDLMDRIST-TIGDR-WVPRLPT 525
P + + +A++ GA+P+++L DR+ T G R W+ + PT
Sbjct: 11 PLVVMASAQAAARGGANPLAELTDRVKTLEAGLRAWLAKQPT 52
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/91 (27%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
Frame = -1
Query: 310 RPVEGPNCKVITHGEMEILVASGQIPQISAQGVGMNGPMGQA-PLVMPNGMMLPGAQHQY 134
R +EG T G AS PQ G G A P P GMM+ Q Y
Sbjct: 112 REIEGERAAASTTGA-GTSAASTTPPQQQHTANAAGGYAGYAAPGAGPGGMMMMMGQPMY 170
Query: 133 MGPPPWGKDDKDKASESVVGSMTDNDEMPPG 41
PPP + + + +G P G
Sbjct: 171 GSPPPPPQQQQQQHHHMAMGGRGGFGHHPGG 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,153,511
Number of Sequences: 37544
Number of extensions: 559393
Number of successful extensions: 1727
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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