Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L11
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 44 2e-05
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 30 0.34
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 28 1.4
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 28 1.4
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 27 2.4
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 4.2
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 5.5
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 26 7.3
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 26 7.3
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 25 9.6
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 9.6
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 25 9.6
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 44.4 bits (100), Expect = 2e-05
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = -3
Query: 783 ERDEKHSDILWNTAVVIRTPET*SGSIARTTFRESAILTNPTTXMEGNTGHPVFATRYGK 604
E++EK S+I++N+ + I T +G++ +R+ + + + P+F T +GK
Sbjct: 90 EKEEKQSNIIYNSCIYI----TENGNLGGV-YRKVHLFDTERKHFKKGSDFPIFETSFGK 144
Query: 603 IAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYM--WNVEARNAAITNCYFT 430
+ V IC+ + NGA+++ +A + Y W++ + A NC
Sbjct: 145 LGVMICWDTAFPEVARIHALNGADLL-----VVATNWENPYSDDWDLVTKARAFENCIPL 199
Query: 429 AAINRVG 409
A NRVG
Sbjct: 200 VAANRVG 206
Score = 30.3 bits (65), Expect = 0.34
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 341 FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRL-DMYVNSLS 168
F+G S GP G L ++G++ VDL+ + +R + R+ D+Y LS
Sbjct: 213 FFGHSKIIGPTGKVIKALDEEKEGVISYTVDLDDAKPLRKNYYTFFEDRMPDLYKRLLS 271
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 30.3 bits (65), Expect = 0.34
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -1
Query: 524 LIRQRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPAHKDLG 345
+++ S + S+ G+ T S ++ S S S + +TSA G AH G
Sbjct: 417 IVQATISQSSTSGSSSGSSSASTTASSSSVSSGSSISSGSSSMSTSYTSASGSSAHSS-G 475
Query: 344 LFYGSS 327
GSS
Sbjct: 476 SSSGSS 481
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -3
Query: 678 AILTNPTTXMEGNTGHP--VFATRYGK-IAVNICFGRHHVLNWMMFGQNGAEIVFNPSAT 508
A NP+ M G P V+ G+ A + G H++ +FG +G+E+ F T
Sbjct: 44 AAAINPSDLMNATGGFPYTVYPRIVGRDYAGTVISGASHLVGTRVFGTSGSELSFTKDGT 103
Query: 507 IA 502
A
Sbjct: 104 HA 105
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 560 QFKTWCRPKQMFTAILPYLVANTGWPVLPSM-XVVGFVKIADSRNVVLAM 706
+F T K +FTA+ P+L A T + ++PS G V + R VL +
Sbjct: 1521 RFPTRVLCKPVFTAVPPFLFAGTDFALIPSRDEPFGLVAVEFGRKGVLCI 1570
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 443 FVIAAFLASTFHMYSLPPSPAIVAD 517
F+ AA + + H+ S+PPSP +++D
Sbjct: 156 FIDAANSSDSCHLVSIPPSPQLLSD 180
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 449 SRTATSQRPSTESANEEFPNEFTSADGKPAHKD 351
S+T S S SA +FP EF +A AH +
Sbjct: 256 SQTRRSSWSSIASAFNDFPEEFPNASNPEAHSN 288
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 503 PEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEF 384
P + A T T KL + A+ +RP E P +F
Sbjct: 434 PNRLTAETVDTNKLTASKEQIASPKRPGPSDNGNEIPTKF 473
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 568 DVVPSEADVHRDLAVSGREYRMAGVTFH 651
DVVP A R L + Y AG TFH
Sbjct: 25 DVVPKTAANFRALCTGEKGYGYAGSTFH 52
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 692 VVLAMLPDHVSGVLMTTAVFQSMSECFSSLSXIEDP 799
+V + PD S L+ VF + SS+S IE P
Sbjct: 454 LVRSQYPDFKSQRLLDDGVFDDVLSAISSMSNIESP 489
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 437 TSQRPSTESANEEFPNEFTSADGKPAHKDLGLFYGS 330
+S R + A +F + F+ + KP+ KDL LF+G+
Sbjct: 145 SSSRLLSTDAFSQFISSFSPPE-KPSMKDLALFHGN 179
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 500 EKAAASTCGTLKLGTQLSRTATSQRPSTESANEE 399
E AA + GTL G+Q T +Q + S N E
Sbjct: 898 EPAAGTVTGTLTSGSQFFTTTIAQASGSVSGNVE 931
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 9.6
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -3
Query: 744 AVVIRTPET*SGSIARTT-FRESAILTNPTTXMEGNTGHPVFATRYGKIAVNICFGRH 574
A + +TP + ++ + E A +T T ++ + YGK VNI F H
Sbjct: 189 AELAKTPSAPAAALKKAAEAAEPATVTEDATDLQNEVDQELLKDMYGKEHVNIVFIGH 246
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,129,456
Number of Sequences: 5004
Number of extensions: 62947
Number of successful extensions: 193
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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