Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L11
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 142 3e-34
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 31 0.98
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 31 0.98
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 31 0.98
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 28 6.9
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 28 6.9
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 28 6.9
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 28 6.9
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 142 bits (344), Expect = 3e-34
Identities = 69/133 (51%), Positives = 83/133 (62%)
Frame = -3
Query: 807 MVIGSSIXERDEKHSDILWNTAVVIRTPET*SGSIARTTFRESAILTNPTTXMEGNTGHP 628
+VI S I ERDE+ D++WNTAVVI G + T ME GHP
Sbjct: 162 IVIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHP 221
Query: 627 VFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI 448
VF T+YG+I +NIC+GRHH NWMM+ NGAEI+FNPSAT+ SE +W +EARNAAI
Sbjct: 222 VFETKYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAI 279
Query: 447 TNCYFTAAINRVG 409
N FT INRVG
Sbjct: 280 ANHVFTVGINRVG 292
Score = 116 bits (279), Expect = 2e-26
Identities = 53/93 (56%), Positives = 65/93 (69%)
Frame = -1
Query: 404 EEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIR 225
E FPNEFTS +G+PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +
Sbjct: 294 EVFPNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCK 353
Query: 224 DRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 126
D + MT RLDMY +++V DY+P + E
Sbjct: 354 DAWGFRMTNRLDMYAQKITEVSNPDYRPDIRRE 386
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 31.1 bits (67), Expect = 0.98
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = -1
Query: 521 IRQRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPAHKDLGL 342
I + R ++ A G G+ LS+ A + N T G H++ L
Sbjct: 380 IEEVRQVDEGAYVCAGMNSAGSSLSKAALKVTTKAVTGNTPAKPPPTIEHG---HQNQTL 436
Query: 341 FYGSSYF--CGPDGVRCPGLSRTRDGLLIAAVDLNLNR 234
GSS C G PG+S RDGL I D +++
Sbjct: 437 MVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQ 474
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 31.1 bits (67), Expect = 0.98
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = -1
Query: 521 IRQRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPAHKDLGL 342
I + R ++ A G G+ LS+ A + N T G H++ L
Sbjct: 380 IEEVRQVDEGAYVCAGMNSAGSSLSKAALKVTTKAVTGNTPAKPPPTIEHG---HQNQTL 436
Query: 341 FYGSSYF--CGPDGVRCPGLSRTRDGLLIAAVDLNLNR 234
GSS C G PG+S RDGL I D +++
Sbjct: 437 MVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQ 474
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 31.1 bits (67), Expect = 0.98
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = -1
Query: 521 IRQRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPAHKDLGL 342
I + R ++ A G G+ LS+ A + N T G H++ L
Sbjct: 380 IEEVRQVDEGAYVCAGMNSAGSSLSKAALKVTTKAVTGNTPAKPPPTIEHG---HQNQTL 436
Query: 341 FYGSSYF--CGPDGVRCPGLSRTRDGLLIAAVDLNLNR 234
GSS C G PG+S RDGL I D +++
Sbjct: 437 MVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQ 474
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 463 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEADVHRDLAVSGREYRMAGV 642
SFNV + + G++R + + ++ + +H +QD+ P+ + RD + ++AG+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPF-MSRDELIDNSVRKLAGM 79
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 176 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 283
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 561 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFT 430
WM FG +G NP A G G+ + N A + N FT
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFT 376
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 561 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFT 430
WM FG +G NP A G G+ + N A + N FT
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFT 91
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 561 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFT 430
WM FG +G NP A G G+ + N A + N FT
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFT 266
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 561 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFT 430
WM FG +G NP A G G+ + N A + N FT
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFT 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,649,719
Number of Sequences: 27780
Number of extensions: 371365
Number of successful extensions: 1174
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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