Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L11
(809 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64370.1 68418.m08086 beta-ureidopropionase, putative / beta-... 154 8e-38
At2g27450.2 68415.m03318 carbon-nitrogen hydrolase family protei... 35 0.056
At2g27450.1 68415.m03317 carbon-nitrogen hydrolase family protei... 35 0.056
At3g50770.1 68416.m05560 calmodulin-related protein, putative si... 30 2.1
At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similari... 30 2.1
At2g03980.1 68415.m00365 GDSL-motif lipase/hydrolase family prot... 29 3.7
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 29 4.8
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 28 6.4
At3g22860.1 68416.m02882 eukaryotic translation initiation facto... 28 8.4
>At5g64370.1 68418.m08086 beta-ureidopropionase, putative /
beta-alanine synthase, putative similar to beta-alanine
synthase [Dictyostelium discoideum] GI:14334061;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 408
Score = 154 bits (373), Expect = 8e-38
Identities = 78/133 (58%), Positives = 89/133 (66%)
Frame = -3
Query: 807 MVIGSSIXERDEKHSDILWNTAVVIRTPET*SGSIARTTFRESAILTNPTTXMEGNTGHP 628
MVI S I ERD H ++LWNTAV+I G + T MEG+TGHP
Sbjct: 176 MVIVSPILERDIDHGEVLWNTAVIIGNNGNIIGKHRKNHIPRVGDFNESTYYMEGDTGHP 235
Query: 627 VFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI 448
VF T +GKIAVNIC+GRHH LNW+ FG NGAEIVFNPSAT+ GE SE MW +EARNAAI
Sbjct: 236 VFETVFGKIAVNICYGRHHPLNWLAFGLNGAEIVFNPSATV-GE-LSEPMWPIEARNAAI 293
Query: 447 TNCYFTAAINRVG 409
N YF +INRVG
Sbjct: 294 ANSYFVGSINRVG 306
Score = 107 bits (258), Expect = 7e-24
Identities = 50/93 (53%), Positives = 65/93 (69%)
Frame = -1
Query: 404 EEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIR 225
E FPN FTS DGKP H D G FYGSS+F PD P LSR +DGLLI+ +DLNL RQ +
Sbjct: 308 EVFPNPFTSGDGKPQHNDFGHFYGSSHFSAPDASCTPSLSRYKDGLLISDMDLNLCRQYK 367
Query: 224 DRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 126
D+ + MT R ++Y + L+K ++ D+KPQVV +
Sbjct: 368 DKWGFRMTARYEVYADLLAKYIKPDFKPQVVSD 400
>At2g27450.2 68415.m03318 carbon-nitrogen hydrolase family protein
low similarity to beta-alanine synthase [Drosophila
melanogaster] GI:14334063; contains Pfam profile
PF00795: hydrolase, carbon-nitrogen family
Length = 326
Score = 35.1 bits (77), Expect = 0.056
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -3
Query: 645 GNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYM---- 478
G+TG VF T++ KI V IC+ + GAEI+F P+A I E + +
Sbjct: 167 GDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTA-IGSEPQDQGLDSRD 225
Query: 477 -WNVEARNAAITNCYFTAAINRVG 409
W + A N A NR+G
Sbjct: 226 HWRRVMQGHAGANVVPLVASNRIG 249
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 341 FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRLDMY 183
FYG+S+ GP G + +L+A DL++ + R + +R D+Y
Sbjct: 264 FYGTSFIAGPTGEIVAEADDKSEAVLVAQFDLDMIKSKRQSWGVFRDRRPDLY 316
>At2g27450.1 68415.m03317 carbon-nitrogen hydrolase family protein
low similarity to beta-alanine synthase [Drosophila
melanogaster] GI:14334063; contains Pfam profile
PF00795: hydrolase, carbon-nitrogen family
Length = 299
Score = 35.1 bits (77), Expect = 0.056
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -3
Query: 645 GNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYM---- 478
G+TG VF T++ KI V IC+ + GAEI+F P+A I E + +
Sbjct: 140 GDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTA-IGSEPQDQGLDSRD 198
Query: 477 -WNVEARNAAITNCYFTAAINRVG 409
W + A N A NR+G
Sbjct: 199 HWRRVMQGHAGANVVPLVASNRIG 222
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 341 FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRLDMY 183
FYG+S+ GP G + +L+A DL++ + R + +R D+Y
Sbjct: 237 FYGTSFIAGPTGEIVAEADDKSEAVLVAQFDLDMIKSKRQSWGVFRDRRPDLY 289
>At3g50770.1 68416.m05560 calmodulin-related protein, putative
similar to regulator of gene silencing
calmodulin-related protein GI:12963415 from [Nicotiana
tabacum]
Length = 205
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -1
Query: 515 QRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPAHKDLGLFY 336
+RRSP+ ++ST + + + + S + S E + F + + DGK + +L ++
Sbjct: 30 RRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQVFSHFDSDGDGKISAFELRHYF 89
Query: 335 GS 330
GS
Sbjct: 90 GS 91
>At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similarity
to elicitor inducible beta-1,3-glucanase NtEIG-E76
[Nicotiana tabacum] GI:11071974
Length = 222
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 482 TCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDG 306
T GT GT S T TS P+T + N +++G P +F G++ GP G
Sbjct: 133 TTGTPTTGTPTSGTPTSGFPNTGTPNTGTNTGMPNSNGMPTSSSSSVFPGTT--LGPTG 189
>At2g03980.1 68415.m00365 GDSL-motif lipase/hydrolase family protein
similar to Anther-specific proline-rich protein APG from
Brassica napus (SP|P40603 ), Arabidopsis thaliana
(GI:22599); contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 367
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +2
Query: 440 QFVIAAFLASTFHMYSLP---PSPAIVADGLKTISAPFCPNIIQ--FKTWCRP 583
+F+ +FL S ++ Y L PS V L +++P CPN+ T C+P
Sbjct: 271 KFIKTSFLYSDYYNYMLGLRGPSSNQVGSSLLNVTSPCCPNVYDGGQLTSCKP 323
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = -1
Query: 521 IRQRRSPEKAAA-----STCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTS-ADGKPA 360
I QR + EK+ ST G K + + TSQ +T + NEE P + S +GK A
Sbjct: 127 IGQRSNQEKSGGPGPNGSTLGRKKALEEEKQVGTSQEKTTPTLNEEAPKTYKSVVEGKRA 186
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = +3
Query: 81 RWSISAWNRLKLLFIFVYD---LRLV----IQLEYFAETVHVHVQALGHVI-TTSVSDLS 236
RW I + F+F + LRLV ++L Y + VH Q++GHVI T+ +++
Sbjct: 351 RWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSVGHVIKLTAQEEVA 410
Query: 237 VQVQVH 254
++++ +
Sbjct: 411 LELRAN 416
>At3g22860.1 68416.m02882 eukaryotic translation initiation factor 3
subunit 8, putative / eIF3c, putative similar to
eukaryotic translation initiation factor 3 subunit 8
(eIF3 p110) [Arabidopsis thaliana] SWISS-PROT:O49160
Length = 800
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 671 KIADSRNVVLAMLPDHVSGVLMTTAVFQSMSECFSSLSXIE 793
++ +R+ +L M+ +S V + T +F S C+ SLS E
Sbjct: 647 RLFKNRDSILDMVKASISEVALRTYLFTYSSSCYKSLSLAE 687
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,763,140
Number of Sequences: 28952
Number of extensions: 345202
Number of successful extensions: 1086
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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