Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L08
(872 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 33 0.33
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 32 0.44
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 32 0.44
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 32 0.58
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 30 2.3
At1g55270.1 68414.m06314 kelch repeat-containing F-box family pr... 30 2.3
At3g44380.1 68416.m04768 expressed protein predicted proteins, A... 29 3.1
At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identic... 29 4.1
At5g63330.1 68418.m07948 DNA-binding bromodomain-containing prot... 29 5.4
At5g03110.1 68418.m00259 expressed protein various predicted pro... 29 5.4
At3g54860.1 68416.m06078 vacuolar protein sorting protein, putat... 29 5.4
At3g45150.1 68416.m04873 TCP family transcription factor, putati... 29 5.4
At5g38210.1 68418.m04606 serine/threonine protein kinase family ... 28 7.1
At1g70180.2 68414.m08076 sterile alpha motif (SAM) domain-contai... 28 9.4
At1g70180.1 68414.m08075 sterile alpha motif (SAM) domain-contai... 28 9.4
At1g04860.1 68414.m00482 ubiquitin-specific protease 2 (UBP2) id... 28 9.4
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = -1
Query: 632 AVRQAAQTVPLVSRNTPLDQNQPAGSGRDTPPTGRSFVTP*-QRARVPVACRAASTPSSR 456
++ Q + P+ R L P +G +PP + +P +RA +P R + ++
Sbjct: 446 SIEQRLPSPPVAQR---LPSPPPRRAGLPSPPPAQRLPSPPPRRAGLPSPMRIGGSHAAN 502
Query: 455 PLTFTGGKPPSXRGRSRAKSLLQPPARRRR-IGAERDELSLSR 330
L P S R K L PP RRRR + + + +SLS+
Sbjct: 503 HLE--SPSPSSLSPPGRKKVLPSPPVRRRRSLTPDEERVSLSQ 543
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 32.3 bits (70), Expect = 0.44
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = -1
Query: 584 PLDQNQPAGSGRDTPPTGRSFVT--P*QRARV-PVACRAASTPSSRPLTFTGGKPPSXRG 414
P D+++P+ + + PPT R T P QR V S+P KPPS R
Sbjct: 161 PFDRSKPSSASANAPPTLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRA 220
Query: 413 RSRAKSLLQPPA-RRRRIGAERDELSLSRSAT 321
+PP+ R + A+ L +R T
Sbjct: 221 EPPTLDTPRPPSPRAASLRADPPRLDAARPTT 252
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 32.3 bits (70), Expect = 0.44
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = -1
Query: 584 PLDQNQPAGSGRDTPPTGRSFVT--P*QRARV-PVACRAASTPSSRPLTFTGGKPPSXRG 414
P D+++P+ + + PPT R T P QR V S+P KPPS R
Sbjct: 160 PFDRSKPSSASANAPPTLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRA 219
Query: 413 RSRAKSLLQPPA-RRRRIGAERDELSLSRSAT 321
+PP+ R + A+ L +R T
Sbjct: 220 EPPTLDTPRPPSPRAASLRADPPRLDAARPTT 251
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 31.9 bits (69), Expect = 0.58
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Frame = -1
Query: 476 ASTPSSRPLTFTGGKPPSXRGRSRAKSLLQ---PPARRRRIGAER--DELSLSRSATSC- 315
++TPS+ P T PP+ ++ + PP + + GA R E +S T+C
Sbjct: 591 STTPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPEQTPKSGAARTDSEPEVSSFWTTCP 650
Query: 314 -CEMVYSQKSSIAFQDSSTDCRTSDCRASWLRQSAATSPVLFARXGH----GVAPEGLSS 150
C ++Y I +++S C+T CR ++ + P + + G P G S
Sbjct: 651 YCYVLYEYP--IIYEESVLKCQTKSCRRAYQAVKVPSPPPVAEEDSYYCCWGFYPIGFSE 708
Query: 149 V 147
V
Sbjct: 709 V 709
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Frame = -1
Query: 503 ARVPVACRAASTPSSRPLTFTG----GKPPSXRGRSRAKSLLQPPARRRRIGAERDELSL 336
+R PV R A +PS P+ G+ P R R+ S + P R R R + L
Sbjct: 485 SRSPVRGRIARSPSRSPVRSASRGSLGRGPLRRSSRRSPS--RSPVRSSRRSLSRSPIQL 542
Query: 335 SRSATSCCEMVYSQKSSIAFQDSSTDCRTSDCRASWLRQSAATSPVLFAR 186
SR + S S++S S S R+S + SPV +R
Sbjct: 543 SRRSLSRSPTRLSRRSLSRSPIRSPRKSVSRSPVRSSRKSVSRSPVRSSR 592
>At1g55270.1 68414.m06314 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 4
[Arabidopsis thaliana] GI:10716953; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 434
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 581 AGYSGTPAALSGRPDGLPYRDGLRFRAFDSS 673
AG+ +L+GR GL RDG + R FD S
Sbjct: 310 AGWRNPCTSLNGRLYGLDCRDGCKLRVFDES 340
>At3g44380.1 68416.m04768 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 186
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 547 SRPDPAGWFWSSGVFRDTSGTVWAA*RTAVPRRPTF 654
SR W WSS + S T A+ +A P+ PTF
Sbjct: 3 SRDQKVKWSWSSALIGAASATAAASLLSAKPKDPTF 38
>At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identical
to purple acid phosphatase (PAP22)GI:20257494 from
[Arabidopsis thaliana]
Length = 434
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 306 HLAAGGGGTREGELIPLRTYPSPPSRGLEKGF 401
H+ G GG REG + + PSP S E F
Sbjct: 351 HITIGDGGNREGLALSFKKPPSPLSEFRESSF 382
>At5g63330.1 68418.m07948 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 477
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 407 RAKSLLQPPARRRRIGAERDELSLSRSATSCCEMVYSQKSSI 282
R S PP +RRR G D +S+ S +M S++ ++
Sbjct: 33 RMNSEASPPLKRRRFGLNGDNNGVSKEVLSLSKMSRSERKNL 74
>At5g03110.1 68418.m00259 expressed protein various predicted
proteins, Arabidopsis thaliana
Length = 283
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/76 (28%), Positives = 28/76 (36%)
Frame = -1
Query: 440 GGKPPSXRGRSRAKSLLQPPARRRRIGAERDELSLSRSATSCCEMVYSQKSSIAFQDSST 261
GG R RSR +S P RR A S +C V +S + S
Sbjct: 31 GGSTSRSRSRSRGRSRASPLFVRRNKSAAAVAQEPSSPKVTCMGQVRVNRSKPKIKPESR 90
Query: 260 DCRTSDCRASWLRQSA 213
D T R WLR ++
Sbjct: 91 DNPTRR-RCEWLRNAS 105
>At3g54860.1 68416.m06078 vacuolar protein sorting protein, putative
similar to Swiss-Prot:Q63615 vacuolar protein sorting
33A (r-vps33a) [Rattus norvegicus]; contains Pfam
domain, PF00995: Sec1 family
Length = 592
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 410 SRAKSLLQPPARRRRIGAERDELSLSRSATSCCEMVYSQKSSIAF 276
S + SL+ P ++ + +G E L+ T C ++VY +S ++F
Sbjct: 45 SGSVSLIIPTSKLKELGLELRHLTAEPVQTECTKVVYLVRSQLSF 89
>At3g45150.1 68416.m04873 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa] ; auxin-induced basic helix-loop-helix
transcription factor - Gossypium hirsutum, EMBL:AF165924
Length = 165
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 254 RTSDCRASWLRQSAATSPVLFARXGHGVAPEGLSSVHP 141
+T SWL Q+A P +FA GHGV + P
Sbjct: 51 KTDGETVSWLLQNA--EPAIFAATGHGVTTTSNEDIQP 86
>At5g38210.1 68418.m04606 serine/threonine protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 686
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 472 EAARHATGTLARC*GVTKERPVGGVSRPDPAG 567
++ R TL RC +T P GV+RP P G
Sbjct: 32 QSQREPCDTLFRCGDLTAGFPFWGVARPQPCG 63
>At1g70180.2 68414.m08076 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 460
Score = 27.9 bits (59), Expect = 9.4
Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 3/150 (2%)
Frame = -1
Query: 821 PXNXSXAXLHPTCDPXRGQNPDEVRGLPRSTLQPDSAAHPQGRPADGAFETNRR--L*NV 648
P + P D +N V G PR P +A G P D + + R N
Sbjct: 227 PPRDAGRRFGPPRDQSPPRNAGRVTGSPRDRSPPRNAGRRMGPPRDQSPPRSTRSFSSNS 286
Query: 647 GRLGTAVRQAAQTVPLVSRNTPLDQNQPAGSGRDTPPTGRSFVTP*Q-RARVPVACRAAS 471
L A + + P + GS R +PP RS + R+R+ RA+
Sbjct: 287 RALSPARNMGSYMSSSQGFSPPRNPRSYMGSSRGSPP--RSNIEDFHGRSRMLDNMRASP 344
Query: 470 TPSSRPLTFTGGKPPSXRGRSRAKSLLQPP 381
P L G+ PS G A+ +L PP
Sbjct: 345 YPVRGVL---NGQAPS-SGAPFARPMLPPP 370
>At1g70180.1 68414.m08075 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 456
Score = 27.9 bits (59), Expect = 9.4
Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 3/150 (2%)
Frame = -1
Query: 821 PXNXSXAXLHPTCDPXRGQNPDEVRGLPRSTLQPDSAAHPQGRPADGAFETNRR--L*NV 648
P + P D +N V G PR P +A G P D + + R N
Sbjct: 227 PPRDAGRRFGPPRDQSPPRNAGRVTGSPRDRSPPRNAGRRMGPPRDQSPPRSTRSFSSNS 286
Query: 647 GRLGTAVRQAAQTVPLVSRNTPLDQNQPAGSGRDTPPTGRSFVTP*Q-RARVPVACRAAS 471
L A + + P + GS R +PP RS + R+R+ RA+
Sbjct: 287 RALSPARNMGSYMSSSQGFSPPRNPRSYMGSSRGSPP--RSNIEDFHGRSRMLDNMRASP 344
Query: 470 TPSSRPLTFTGGKPPSXRGRSRAKSLLQPP 381
P L G+ PS G A+ +L PP
Sbjct: 345 YPVRGVL---NGQAPS-SGAPFARPMLPPP 370
>At1g04860.1 68414.m00482 ubiquitin-specific protease 2 (UBP2)
identical to GI:11993463
Length = 961
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = -1
Query: 461 SRPLTFTGGKPPSXRGRSRAKSLLQPPARRRRIGAERDELSLSRSATSCCEMVYSQKSSI 282
S P+ F P + SRAK PP R + ++ ++S E+ S KS
Sbjct: 382 SLPVPFKKSPPKKPQPVSRAKKAKLPPKRVPKNVSKVSKVSKVLPGMVLSELNSSGKSMA 441
Query: 281 AFQDSSTDC 255
DS T C
Sbjct: 442 VTADSDTSC 450
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,769,987
Number of Sequences: 28952
Number of extensions: 320515
Number of successful extensions: 966
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2048424000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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