Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_L02
         (872 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l...   126   1e-27
UniRef50_Q5XL24 Cluster: pH-response transcription factor pacC/R...    36   1.0  
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R...    34   4.1  
UniRef50_UPI0000E46D7B Cluster: PREDICTED: similar to putative e...    34   5.4  
UniRef50_O42854 Cluster: SH3 domain-containing protein C23A1.17;...    34   5.4  
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ...    33   7.2  
UniRef50_Q5D5G3 Cluster: Phage tail sheath protein; n=1; Wolbach...    33   7.2  
UniRef50_A1R9I1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru...    33   9.5  
UniRef50_Q93I56 Cluster: Iturin A synthetase A; n=6; Bacillus|Re...    33   9.5  

>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
           latent virus|Rep: Coat protein - Bombyx mori Macula-like
           latent virus
          Length = 237

 Score =  126 bits (303), Expect = 1e-27
 Identities = 64/84 (76%), Positives = 66/84 (78%)
 Frame = -1

Query: 869 TXXSFXXXIGGLALMHQATLPLRXRXHQPRSSNPPIPYTNHPRLNIHFHQSPDAVLEGVR 690
           T  S    +GGLALMHQATLP       P   +P IPYTNHPRLNIHFHQS DAVLEGVR
Sbjct: 155 TPSSARITMGGLALMHQATLPCDLGYINPIIKSP-IPYTNHPRLNIHFHQSADAVLEGVR 213

Query: 689 AGVKASVVIRGSISVSHPLVTGHG 618
           AGVKASVVIRGSISVSHPLVTGHG
Sbjct: 214 AGVKASVVIRGSISVSHPLVTGHG 237


>UniRef50_Q5XL24 Cluster: pH-response transcription factor
           pacC/RIM101; n=15; Pezizomycotina|Rep: pH-response
           transcription factor pacC/RIM101 - Aspergillus giganteus
          Length = 678

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -2

Query: 787 NPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 608
           +P  Q+P  H   T    ++  +P T       P L PP S+++ ++  +P S+     V
Sbjct: 391 SPPSQLPPSHATATTSAATMMSHPATHSPSTGTPALTPPSSAQSYTSGRSPISMSSAHRV 450

Query: 607 SPPY 596
           SPP+
Sbjct: 451 SPPH 454


>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
           OmpA/MotB precursor - Nitrobacter hamburgensis (strain
           X14 / DSM 10229)
          Length = 673

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -2

Query: 769 PRFHTPTTPDLTSIS--INPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 599
           P   TP  PD+T  S    P TP     +P   PP  + AP+A   P+     K  +PP
Sbjct: 242 PGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPPTGPAGTKAGTPP 300


>UniRef50_UPI0000E46D7B Cluster: PREDICTED: similar to putative
           extensin precursor; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to putative extensin
           precursor - Strongylocentrotus purpuratus
          Length = 167

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = -2

Query: 817 PPFPCDXGYINPDH-QIPR-FHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 644
           P FP   GYI P+H   PR + TPT P      I P  P    F  G   P     P  Y
Sbjct: 13  PSFP--RGYIIPNHPSFPRGYITPTYPSFPRGYITPTHP---SFPRGYITPTYPSFPRGY 67

Query: 643 LTPSSLGMXKG 611
           +TP+     +G
Sbjct: 68  ITPTYPSFPRG 78


>UniRef50_O42854 Cluster: SH3 domain-containing protein C23A1.17; n=1;
            Schizosaccharomyces pombe|Rep: SH3 domain-containing
            protein C23A1.17 - Schizosaccharomyces pombe (Fission
            yeast)
          Length = 1611

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 23/69 (33%), Positives = 34/69 (49%)
 Frame = -2

Query: 835  SPLCIKPPFPCDXGYINPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 656
            +P  I PP P      +P  + P+ H P+ P    +S +P  P  +   P + P LSS+A
Sbjct: 965  APPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLAR--VPPV-PKLSSKA 1021

Query: 655  PSAYLTPSS 629
            P   L PS+
Sbjct: 1022 PPVPL-PSA 1029


>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
           Globe virus|Rep: 25kDa coat protein - Grapevine Red
           Globe virus
          Length = 235

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -1

Query: 782 RSSNP----PIPYTNHPRLNIHFHQSPDAVLEGVRAGV-KASVVIRGSISVS 642
           RS+NP     + Y N P+L + FH++ DA    V   V   S+VIRG +  S
Sbjct: 174 RSTNPVVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225


>UniRef50_Q5D5G3 Cluster: Phage tail sheath protein; n=1; Wolbachia
           endosymbiont of Drosophila mojavensis|Rep: Phage tail
           sheath protein - Wolbachia endosymbiont of Drosophila
           mojavensis
          Length = 296

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
 Frame = -3

Query: 564 ALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVK----IADNNLVTHKELALKVSSI 397
           +++ V+PRIL +P  TH L ED       A++    K    I  +   T+ E A+K    
Sbjct: 102 SIVHVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIVADGPNTNDEEAIKWRKS 161

Query: 396 IG-TRVYVLDP 367
           +G +RVYV+DP
Sbjct: 162 VGSSRVYVVDP 172


>UniRef50_A1R9I1 Cluster: Putative uncharacterized protein; n=1;
           Arthrobacter aurescens TC1|Rep: Putative uncharacterized
           protein - Arthrobacter aurescens (strain TC1)
          Length = 392

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 868 PXXXXAXXLAVSPLCIKPPFPCDXGYINPDHQIPRFHTPTTPDLTSIS-INPLTPY 704
           P    A  +A+ P+   PP         P   +P   TPT P++T I+   P TP+
Sbjct: 155 PAAPTAPAVAIDPVVPAPPLASPPPATIPPSSVPPVSTPTAPEITPITPAEPSTPH 210


>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
           virus|Rep: Coat protein - Grapevine fleck virus
          Length = 230

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 764 IPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGSISVSHPL 633
           + YT+ PRL   F+++   V  G  A +  S++IRG I  S P+
Sbjct: 180 VTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAPI 223


>UniRef50_Q93I56 Cluster: Iturin A synthetase A; n=6; Bacillus|Rep:
            Iturin A synthetase A - Bacillus subtilis
          Length = 3982

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 773  NPPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGSIS 648
            NPP+ + N P   IHFH SP  V +           +RG +S
Sbjct: 1035 NPPLAHFNEPNPLIHFHSSPFYVNQEAAEFTSGDEPLRGGVS 1076


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,514,068
Number of Sequences: 1657284
Number of extensions: 13343993
Number of successful extensions: 38357
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38270
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)