Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_L01
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 143 1e-34
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 143 1e-34
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 143 1e-34
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 143 1e-34
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 142 4e-34
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 142 4e-34
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 3.0
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 143 bits (347), Expect = 1e-34
Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -3
Query: 745 IQXXGGPSRTKXMGQRTSGEP-IPVDSVLPKMK*LTALVSPRAKDTKVSLXVGTQRSYPV 569
IQ GG K R E + VD+V + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 RHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 389
+ KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G KNN
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNN 299
Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 300 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 143 bits (347), Expect = 1e-34
Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -3
Query: 745 IQXXGGPSRTKXMGQRTSGEP-IPVDSVLPKMK*LTALVSPRAKDTKVSLXVGTQRSYPV 569
IQ GG K R E + VD+V + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 RHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 389
+ KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G KNN
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNN 299
Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 300 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 143 bits (347), Expect = 1e-34
Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -3
Query: 745 IQXXGGPSRTKXMGQRTSGEP-IPVDSVLPKMK*LTALVSPRAKDTKVSLXVGTQRSYPV 569
IQ GG K R E + VD+V + + + + R K + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 568 RHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 389
+ KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G KNN
Sbjct: 145 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNN 201
Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 202 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 114 KDRIRE 97
+D + E
Sbjct: 293 RDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 143 bits (347), Expect = 1e-34
Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -3
Query: 745 IQXXGGPSRTKXMGQRTSGEP-IPVDSVLPKMK*LTALVSPRAKDTKVSLXVGTQRSYPV 569
IQ GG K R E + VD+V + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 RHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 389
+ KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G KNN
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNN 299
Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 300 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 143 bits (347), Expect = 1e-34
Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -3
Query: 745 IQXXGGPSRTKXMGQRTSGEP-IPVDSVLPKMK*LTALVSPRAKDTKVSLXVGTQRSYPV 569
IQ GG K R E + VD+V + + + + R K + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 568 RHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 389
+ KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G KNN
Sbjct: 145 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNN 201
Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 202 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 114 KDRIRE 97
+D + E
Sbjct: 293 RDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 143 bits (347), Expect = 1e-34
Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -3
Query: 745 IQXXGGPSRTKXMGQRTSGEP-IPVDSVLPKMK*LTALVSPRAKDTKVSLXVGTQRSYPV 569
IQ GG K R E + VD+V + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 RHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 389
+ KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G KNN
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNN 299
Query: 388 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 300 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 114 KDRIRE 97
+D + E
Sbjct: 391 RDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 142 bits (343), Expect = 4e-34
Identities = 64/102 (62%), Positives = 80/102 (78%)
Frame = -3
Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
+ P + KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG- 248
Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 249 --KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 114 KDRIRE 97
+D + E
Sbjct: 343 RDFLAE 348
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 665 VAQDEMIDCIXXXXXXXXXXXXXRWHTKKLPRKTXQG 555
+A +MID I RWHTKKLPRKT +G
Sbjct: 163 IAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 142 bits (343), Expect = 4e-34
Identities = 64/102 (62%), Positives = 80/102 (78%)
Frame = -3
Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFXVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
+ P + KGLRKVACIGAWHPSRV+F VARAGQKG+HHRT +N KIYRIG+ ++G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG- 248
Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 249 --KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 114 KDRIRE 97
+D + E
Sbjct: 343 RDFLAE 348
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 665 VAQDEMIDCIXXXXXXXXXXXXXRWHTKKLPRKTXQG 555
+A +MID I RWHTKKLPRKT +G
Sbjct: 163 IAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 209 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 331
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 157 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCLLHH 327
++T LG G+ +EF +D F C +RLSK++ LFR + + C H
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,676,677
Number of Sequences: 27780
Number of extensions: 371234
Number of successful extensions: 927
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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