Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_K23
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 186 3e-47
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 186 3e-47
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 186 3e-47
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 186 3e-47
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 186 3e-47
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 186 bits (453), Expect = 3e-47
Identities = 85/105 (80%), Positives = 92/105 (87%)
Frame = -3
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 249 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 308
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 268
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G G+ K
Sbjct: 309 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 353
Score = 119 bits (287), Expect = 4e-27
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -1
Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 114
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 345 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 404
Query: 113 KDRIREE 93
KDR++EE
Sbjct: 405 KDRLKEE 411
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2
Query: 685 PXHXDXXXAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
P QDEMIDC+ TSRWHTKKLPRKTH+G
Sbjct: 215 PIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 258
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 186 bits (453), Expect = 3e-47
Identities = 85/105 (80%), Positives = 92/105 (87%)
Frame = -3
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 268
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G G+ K
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 342
Score = 119 bits (287), Expect = 4e-27
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -1
Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 114
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
Query: 113 KDRIREE 93
KDR++EE
Sbjct: 394 KDRLKEE 400
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2
Query: 685 PXHXDXXXAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
P QDEMIDC+ TSRWHTKKLPRKTH+G
Sbjct: 204 PIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 186 bits (453), Expect = 3e-47
Identities = 85/105 (80%), Positives = 92/105 (87%)
Frame = -3
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 268
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G G+ K
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 329
Score = 119 bits (287), Expect = 4e-27
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -1
Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 114
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 380
Query: 113 KDRIREE 93
KDR++EE
Sbjct: 381 KDRLKEE 387
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2
Query: 685 PXHXDXXXAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
P QDEMIDC+ TSRWHTKKLPRKTH+G
Sbjct: 191 PIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 186 bits (453), Expect = 3e-47
Identities = 85/105 (80%), Positives = 92/105 (87%)
Frame = -3
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 268
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G G+ K
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 329
Score = 119 bits (287), Expect = 4e-27
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -1
Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 114
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 380
Query: 113 KDRIREE 93
KDR++EE
Sbjct: 381 KDRLKEE 387
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2
Query: 685 PXHXDXXXAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
P QDEMIDC+ TSRWHTKKLPRKTH+G
Sbjct: 191 PIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 186 bits (453), Expect = 3e-47
Identities = 85/105 (80%), Positives = 92/105 (87%)
Frame = -3
Query: 582 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 403
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 402 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 268
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G G+ K
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 342
Score = 119 bits (287), Expect = 4e-27
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -1
Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 114
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
Query: 113 KDRIREE 93
KDR++EE
Sbjct: 394 KDRLKEE 400
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -2
Query: 685 PXHXDXXXAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 554
P QDEMIDC+ TSRWHTKKLPRKTH+G
Sbjct: 204 PIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,974,687
Number of Sequences: 53049
Number of extensions: 663047
Number of successful extensions: 1826
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -