Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_K19
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +2

Query: 107  NNXYSIXGNHGTASRCVPQIHYN 175
            ++ Y     H     C P +HYN
Sbjct: 1219 SSFYVCVNGHLVPQNCAPGLHYN 1241


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 199 KKKNVSITNIILHSLQ 246
           KK+  +++N+ LHSL+
Sbjct: 15  KKRKCTVSNVSLHSLK 30


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 368 NII*IKLSH*LQXNVIEFPNDS 303
           +++ +KL+H L  +V  FP+D+
Sbjct: 16  SLLTLKLTHALSSSVQNFPSDA 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,876
Number of Sequences: 336
Number of extensions: 2176
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)