Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_K18
         (842 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    27   0.25 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    27   0.25 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   1.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   7.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.2  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 709 WDXNGSVPXRYRAKTRGRGGSSRGNVPDVFPETAPR 602
           W  N  +  +   KT+G GGS  G   D+ P+ +P+
Sbjct: 289 WFQNRRMKWKKENKTKGEGGSEGGG-DDISPQGSPQ 323


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 709 WDXNGSVPXRYRAKTRGRGGSSRGNVPDVFPETAPR 602
           W  N  +  +   KT+G GGS  G   D+ P+ +P+
Sbjct: 291 WFQNRRMKWKKENKTKGEGGSEGGG-DDISPQGSPQ 325


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 275 LPEWSCEQSAWWGACGR 225
           L +++CE   WW  C R
Sbjct: 50  LKQYTCELKLWWEFCQR 66


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 628 LEHCHASFHLGHGSWLCTALGXIRXHPXXP 717
           L HCH  FH+  G  L   +G     P  P
Sbjct: 601 LFHCHIEFHVEVGMALVFKIGEDYEMPPVP 630


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 272  PEWSCEQSAWWGA 234
            P+W+ + S WW +
Sbjct: 1033 PDWTTKPSTWWSS 1045


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 649 SSRGNVPDVFPETAPRHT 596
           SS  + P VFP  AP H+
Sbjct: 182 SSSSSPPGVFPVDAPMHS 199


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 628 LEHCHASFHLGHGSWLCTALGXIRXHPXXP 717
           L HCH  FH+  G  L   +G     P  P
Sbjct: 668 LFHCHFLFHIVIGMNLVLQVGTHADLPPVP 697


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 329 PPLRSLISNLSNTCDLTPLPEWSCE 255
           PP+ S  + L N  D+TP    +C+
Sbjct: 120 PPVTSSSNILQNLADITPNVTPNCD 144


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 329 PPLRSLISNLSNTCDLTPLPEWSCE 255
           PP+ S  + L N  D+TP    +C+
Sbjct: 120 PPVTSSSNILQNLADITPNVTPNCD 144


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 329 PPLRSLISNLSNTCDLTPLPEWSCE 255
           PP+ S  + L N  D+TP    +C+
Sbjct: 120 PPVTSSSNILQNLADITPNVTPNCD 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,013
Number of Sequences: 336
Number of extensions: 1175
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)