Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_K17
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    62   4e-12
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.8  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 62.5 bits (145), Expect = 4e-12
 Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
 Frame = -3

Query: 617 LHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 438
           L   L    +++  +HG   Q +R  +L  F+     VLVAT VAARGLDI  V  VIN+
Sbjct: 425 LATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINY 484

Query: 437 TLPATLEHYIHXXXXXXXXXXXXXXVSLAGEG-ERNLVKSIVKRASKPVKSRQIPPDIVA 261
            LP +++ Y+H               S   E  +RNL   + K  S+    ++IP  + +
Sbjct: 485 DLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKILSQ--AKQEIPEWLGS 542

Query: 260 KXQ-GETDQTRTGDCRNSRRG 201
           K   G  DQ    D R    G
Sbjct: 543 KSYGGSADQFGGRDIRGDDFG 563


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 668 SATGPSSSCRPSGQAHRLHVMLGMLGVKAAELHGA 564
           + +G  +SC+ S    ++   L M+ V A + HGA
Sbjct: 179 AVSGGIASCKLSYDIAKVAENLDMINVMAYDFHGA 213


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 668 SATGPSSSCRPSGQAHRLHVMLGMLGVKAAELHGA 564
           + +G  +SC+ S    ++   L M+ V A + HGA
Sbjct: 180 AVSGGIASCKLSYDIAKVAENLDMINVMAYDFHGA 214


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 668 SATGPSSSCRPSGQAHRLHVMLGMLGVKAAELHGA 564
           + +G  +SC+ S    ++   L M+ V A + HGA
Sbjct: 180 AVSGGIASCKLSYDIAKVAENLDMINVMAYDFHGA 214


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 340 SPSPASETDTPARPALAVRPTLCI*CSKVAG 432
           SPSP S      + +   RP  C  C++  G
Sbjct: 115 SPSPTSSVSPEVKDSSRDRPFTCEVCNRSFG 145


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 732 GYARGASATREAMLAALVCRTFRDRTV 652
           G+ARG   T + + AAL  +T  ++ +
Sbjct: 219 GFARGIPDTSKQLAAALGMQTTNEKEI 245


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 732 GYARGASATREAMLAALVCRTFRDRTV 652
           G+ARG   T + + AAL  +T  ++ +
Sbjct: 221 GFARGIPDTSKQLAAALGMQTTNEKEI 247


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 732 GYARGASATREAMLAALVCRTFRDRTV 652
           G+ARG   T + + AAL  +T  ++ +
Sbjct: 219 GFARGIPDTSKQLAAALGMQTTNEKEI 245


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 732 GYARGASATREAMLAALVCRTFRDRTV 652
           G+ARG   T + + AAL  +T  ++ +
Sbjct: 221 GFARGIPDTSKQLAAALGMQTTNEKEI 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,533
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)