Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_K17
(796 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 89 4e-18
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 1e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 1e-12
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 67 1e-11
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 66 3e-11
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 61 1e-09
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 59 4e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 1e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 53 2e-07
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 49 5e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 49 5e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 49 5e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 48 9e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 48 1e-05
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 48 1e-05
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 44 1e-04
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 39 0.004
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 39 0.005
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 38 0.009
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 37 0.022
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 35 0.066
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 34 0.12
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 34 0.12
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 34 0.12
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 32 0.47
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 32 0.47
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 32 0.47
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 31 1.1
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 31 1.4
SB_59279| Best HMM Match : SURF6 (HMM E-Value=3.5) 31 1.4
SB_5270| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 30 1.9
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 30 1.9
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_815| Best HMM Match : Ribosomal_60s (HMM E-Value=0.14) 30 1.9
SB_54| Best HMM Match : Actin (HMM E-Value=0) 30 2.5
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 2.5
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 29 3.3
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_53158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04) 29 5.7
SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 5.7
SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09) 28 7.6
SB_12456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 28 7.6
SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 28 7.6
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 89.0 bits (211), Expect = 4e-18
Identities = 52/129 (40%), Positives = 74/129 (57%)
Frame = -3
Query: 626 AHRLHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTV 447
AH+L ++LG++G+ A ELHG L Q QRL++L++F+ + D+LVATD+AARGLDI GV
Sbjct: 21 AHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGVKNS 80
Query: 446 INFTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIVKRASKPVKSRQIPPDI 267
+ TL GE ER +K +VK A VKSR +PP+I
Sbjct: 81 KSVTL--------------------------VGEKERKALKEVVKNARTAVKSRIVPPEI 114
Query: 266 VAKXQGETD 240
+ K G+ +
Sbjct: 115 IEKYSGKIE 123
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 70.9 bits (166), Expect = 1e-12
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -3
Query: 617 LHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 438
+H L + GV+A +HG +Q +R+ +++ F + DVLVATDVA++GLD P + VINF
Sbjct: 103 IHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINF 162
Query: 437 TLPATLEHYI 408
+P +E+Y+
Sbjct: 163 DMPEDIENYV 172
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 70.9 bits (166), Expect = 1e-12
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -3
Query: 617 LHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 438
+H L + GV+A +HG +Q +R+ +++ F + DVLVATDVA++GLD P + VINF
Sbjct: 103 IHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINF 162
Query: 437 TLPATLEHYI 408
+P +E+Y+
Sbjct: 163 DMPEDIENYV 172
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/104 (35%), Positives = 51/104 (49%)
Frame = -3
Query: 626 AHRLHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTV 447
A L + L G +HG +Q +R ++L+ FR +LVAT VAARGLDIP V V
Sbjct: 1113 ADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHV 1172
Query: 446 INFTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIV 315
INF LP +E Y+H S +N+ K ++
Sbjct: 1173 INFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELM 1216
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = -3
Query: 608 MLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLP 429
M LG+ LH L+Q +RL +L RF+ +LVATDVA+RGLDIP V V+N +P
Sbjct: 266 MFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIP 325
Query: 428 ATLEHYIH 405
A + YIH
Sbjct: 326 ADPKDYIH 333
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 584 AAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
A+ LH Q R +K FR+ + D+LVATDVA+RGLD P V VIN+ LP T+E YIH
Sbjct: 359 ASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIH 418
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = -3
Query: 617 LHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 438
L + L G +HG Q +R ++L FR+ + VL+AT+VAARGLDI V VINF
Sbjct: 978 LAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINF 1037
Query: 437 TLPATLEHYIH 405
LP+ ++ Y+H
Sbjct: 1038 DLPSDIDEYVH 1048
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/132 (29%), Positives = 63/132 (47%)
Frame = -3
Query: 620 RLHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVIN 441
RL +L ++ + LH ++ Q QRL +L RF+ +L+ATDVAARGLDI + VI+
Sbjct: 471 RLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIH 530
Query: 440 FTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIVKRASKPVKSRQIPPDIVA 261
+ +P E Y+H V L G + + +K + ++Q+ +V
Sbjct: 531 YQVPKDPEVYVHRSGRTARASHEGLSVVLVGPEDLAHYRKTMKTLNNASLNKQLKSPLVP 590
Query: 260 KXQGETDQTRTG 225
T+TG
Sbjct: 591 LGFSGKYPTKTG 602
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3
Query: 587 KAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYI 408
+A LHG NQ QR +L + D+LVATDVA RG+DI V+ VIN+ + T+E Y
Sbjct: 310 RATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYT 369
Query: 407 H 405
H
Sbjct: 370 H 370
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -3
Query: 575 LHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
LHG + Q QR +LK FRE + LVATDVAARGLDIP ++ V+ P ++ YIH
Sbjct: 334 LHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIH 390
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = -3
Query: 581 AELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
A +HG + Q +R +K FR Q+ VL++TDV ARGLD+ V+ VIN+ LP E YIH
Sbjct: 264 ASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIH 322
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -3
Query: 581 AELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
+ +HG ++Q +R +K FR + VL+ TD+ ARG+D+ V+ VIN+ LP+ E+YIH
Sbjct: 358 SSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIH 416
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = -3
Query: 599 MLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATL 420
++ ++A + G R + ++F+ + AD+LV TD+A+RGLD V+ VINF P ++
Sbjct: 718 VVALRATKARGNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSM 777
Query: 419 EHYIH 405
YIH
Sbjct: 778 VDYIH 782
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/63 (36%), Positives = 42/63 (66%)
Frame = -3
Query: 593 GVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEH 414
G+ + ++ +L+Q R ++ +F+ ++ V+V TDVAARG+DIP ++ VINF P +
Sbjct: 499 GIDCSYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKL 558
Query: 413 YIH 405
++H
Sbjct: 559 FVH 561
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = -3
Query: 593 GVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEH 414
G+ +H Q QR + +K FR + VL+AT++ RG+D GVN VIN+ P +
Sbjct: 407 GINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVA 466
Query: 413 YIH 405
YIH
Sbjct: 467 YIH 469
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = -3
Query: 563 LNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
L Q R +L F+ A +L+ATDVA+RGLDI + VIN+ P +E Y+H
Sbjct: 76 LEQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVH 128
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = -3
Query: 608 MLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLP 429
+L + + E+HG Q +R + F ++ +L+ TDVAARGLDIP V+ ++ +
Sbjct: 837 LLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPA 896
Query: 428 ATLEHYIH 405
+ YIH
Sbjct: 897 DDPKEYIH 904
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = -3
Query: 569 GALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
G+ Q +RL+++++ + +L++TD+ ARG+D VN V+N +P E Y+H
Sbjct: 246 GSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLH 300
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -3
Query: 596 LGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 417
LG +H ++Q R FR+ LV +D+ RG+DI VN VINF P E
Sbjct: 314 LGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSE 373
Query: 416 HYIH 405
Y+H
Sbjct: 374 TYLH 377
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -3
Query: 596 LGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 417
LG +H ++Q R FR+ LV +D+ RG+DI VN VINF P E
Sbjct: 314 LGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSE 373
Query: 416 HYIH 405
Y+H
Sbjct: 374 TYLH 377
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 48.0 bits (109), Expect = 9e-06
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Frame = -3
Query: 593 GVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLP----- 429
G A L G + QR+ L+RFR + +L+ T+V+ARG+D+ V VIN+ +P
Sbjct: 368 GHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQG 427
Query: 428 -ATLEHYIHXXXXXXXXXXXXXXVS-LAGEGERNLVKSIVKRASKPVKSRQ 282
A E Y+H V+ + G+ N++K I + K ++ Q
Sbjct: 428 KADFETYLHRIGRTGRFGKSGIAVNFIDGQRSMNIMKKIEEHFGKKIQHLQ 478
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = -3
Query: 575 LHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
+H + Q +RL ++F+ + +LVAT++ RG+DI VN V N+ +P + Y+H
Sbjct: 365 IHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 421
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = -3
Query: 575 LHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
LHG + R FR+ ++ +LV TDV ARG+DIP VN VI + P++ ++H
Sbjct: 121 LHGKMKS-NRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVH 176
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -3
Query: 536 LKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYI 408
LK FR+ Q ++LVAT V GLD+P N V+ F P Y+
Sbjct: 137 LKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYV 179
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = -3
Query: 533 KRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 405
++F+ + +LVAT++ RG+DI VN V N+ +P + Y+H
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 48
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -3
Query: 605 LGMLGVKAAELHG--ALNQPQRLDS-LKRFREQQADVLVATDVAARGLDIPGVNTVINFT 435
L LG+ AA L+ A+ P + L+ FR Q +LV T+ RGLD ++ V
Sbjct: 445 LRYLGLNAAALYKQVAIPDPTKYHKFLRDFRTGQIQLLVGTEETVRGLDFKELDHVYLME 504
Query: 434 LPATLEHYIH 405
+P +E Y+H
Sbjct: 505 VPKNVEEYLH 514
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -3
Query: 506 VLVATDVAARGLDIPGVNTVINFTLPATLEHYI 408
V+VAT G+DIP V+ +I+F +P+ +EHY+
Sbjct: 314 VVVATCALGMGVDIPDVDHIIHFGIPSEVEHYV 346
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -3
Query: 596 LGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 417
L +A H ++ QR KRF + + AT GLD V +I++ +P + E
Sbjct: 811 LSWEAESYHAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFE 870
Query: 416 HYI 408
Y+
Sbjct: 871 SYV 873
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -1
Query: 283 KYRPISSPNXREKLIKLEPEIVAILDEE-YAEKQMNKMEKQTAKLEVVLKKDEAQPGPQH 107
K P+ +E+ ++ EP+ +DEE E+Q++ KQ ++E + ++++ + Q
Sbjct: 261 KEEPVEEETKQEEPVEEEPKQEEAVDEEPKKEEQVDGEPKQEEQVEELKQEEQIEEPKQE 320
Query: 106 EPQRQRDWFQTPKQKREEKE 47
EP + + P ++ +KE
Sbjct: 321 EPVEEEPKQEKPVEEEPKKE 340
Score = 31.5 bits (68), Expect = 0.81
Identities = 19/76 (25%), Positives = 41/76 (53%)
Frame = -1
Query: 274 PISSPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQR 95
PI +++L++ EP+ ++EE KQ +E++ + E V ++ + + + EP++
Sbjct: 20 PIEEGPKQKELVEEEPKQEEQVEEE--PKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQ 77
Query: 94 QRDWFQTPKQKREEKE 47
+ Q PKQ+ +E
Sbjct: 78 EEPVEQKPKQEEPVEE 93
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/78 (20%), Positives = 44/78 (56%)
Frame = -1
Query: 277 RPISSPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQ 98
+P+ + +E+ I+ P+ +++EE KQ ++E++ + E V ++ + + + EP+
Sbjct: 9 QPVEEESKQEEPIEEGPKQKELVEEE--PKQEEQVEEEPKQEEPVEEEPKQEEPVKEEPK 66
Query: 97 RQRDWFQTPKQKREEKER 44
++ + PKQ+ +++
Sbjct: 67 QEEPVEEEPKQEEPVEQK 84
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = -1
Query: 274 PISSPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQR 95
P+ +E+ + E E +++EE K+ +E++T + E V ++ + + EP++
Sbjct: 234 PVEEETRQEEPDEKEREQEELVEEE--PKKEEPVEEETKQEEPVEEEPKQEEAVDEEPKK 291
Query: 94 QRDWFQTPKQKREEKE 47
+ PKQ+ + +E
Sbjct: 292 EEQVDGEPKQEEQVEE 307
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = -1
Query: 274 PISSPNXREKLIKLEPEIVAILDEE-YAEKQMNKMEKQTAKLEVVLKKDEAQPG-PQHEP 101
P +E+L++ EP+ ++EE E+ + + KQ ++ KK+E G P+ E
Sbjct: 244 PDEKEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQEEAVDEEPKKEEQVDGEPKQEE 303
Query: 100 Q----RQRDWFQTPKQKREEKE 47
Q +Q + + PKQ+ +E
Sbjct: 304 QVEELKQEEQIEEPKQEEPVEE 325
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 593 GVKAAELHG-ALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 417
G + + HG L + ++++ +K+F+ + A L+AT+ G VN V + P TL
Sbjct: 1066 GATSLKYHGKGLTENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLT 1125
Query: 416 HYI 408
++
Sbjct: 1126 SWV 1128
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 479 RGLDIPGVNTVINFTLPATLEHYIH 405
RG+DI VN VINF P E Y+H
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLH 29
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 479 RGLDIPGVNTVINFTLPATLEHYIH 405
RG+DI VN VINF P E Y+H
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLH 29
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = -1
Query: 238 KLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKD----EAQPGPQHE-PQRQRDWFQT 74
K E + + L EE M K+EK+ AK + +++ EA Q E Q+Q W Q
Sbjct: 1131 KAEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQKQAAWRQQ 1190
Query: 73 PKQKREEKERLAL 35
++++ KERL +
Sbjct: 1191 EEEEQRVKERLQI 1203
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = -1
Query: 250 EKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTP 71
EKL K + E+ +E E++ K EK+ + E +K+ + Q E ++Q++ +
Sbjct: 295 EKLAKKKEELKERKRQEKLEQKAKKKEKERQERE--KEKEREKERIQQEKEKQKERREKE 352
Query: 70 KQKREEKE 47
KQK +EK+
Sbjct: 353 KQKHQEKK 360
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -1
Query: 205 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERL 41
EE K+ K+EK K E + ++ + Q +++++ + K+K EKER+
Sbjct: 284 EEAERKKQEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKERI 338
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -1
Query: 250 EKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTP 71
+K K E E E+ EK+ + EK+ K +K + Q + E QR+++ +
Sbjct: 315 QKAKKKEKERQEREKEKEREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKE 374
Query: 70 KQKREEKERL 41
KQK E++ L
Sbjct: 375 KQKELERKEL 384
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/57 (24%), Positives = 34/57 (59%)
Frame = -1
Query: 205 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLAL 35
E+ E++ +++++ K + +K++ + + E +RQR+ + K+K++E ER L
Sbjct: 328 EKEKEREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQKELERKEL 384
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = -1
Query: 253 REKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQT 74
R+K KLE +A EE E++ + +Q AK KK++ + + E +R+++ Q
Sbjct: 288 RKKQEKLEK--LAKKKEELKERKRQEKLEQKAK-----KKEKERQEREKEKEREKERIQQ 340
Query: 73 PKQKREEKERLALTTH 26
K+K++E+ H
Sbjct: 341 EKEKQKERREKEKQKH 356
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -3
Query: 587 KAAELHGALNQPQRLDSLKRFREQQADVLVATDVA 483
+ A LHG ++Q +R L +F++++ +LVATDVA
Sbjct: 755 EVALLHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -1
Query: 208 DEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGP---QHEPQRQRDWFQTPKQKREEKERLA 38
+EE +Q + E+Q + E V K+ E Q Q Q Q+ + K+++EEK+R+A
Sbjct: 634 EEEERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQEQQRQQELQKRQQEEKQRMA 693
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -3
Query: 641 RPSGQAHRLHVMLG---MLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGL 471
RP+ L L + G++ LH L+ ++ + RF + ++ VL++T V G+
Sbjct: 73 RPAAAVEELAPQLATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGV 132
Query: 470 DIPGVNTVI 444
D+P ++
Sbjct: 133 DVPNATMMV 141
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 563 LNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPAT 423
L+Q ++L+ + RFR + LV+T V GLDI V+ ++ F A+
Sbjct: 564 LSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHAS 610
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = -3
Query: 644 CRPSGQAHRLHVMLGMLGVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGLDI 465
CR + L G+ A H L +R + + E + V+ AT G+D
Sbjct: 255 CRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMGVDK 314
Query: 464 PGVNTVINFTLPATLEHY 411
V V +++LP ++E Y
Sbjct: 315 GDVRFVAHWSLPQSMEGY 332
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.5 bits (68), Expect = 0.81
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = -3
Query: 476 GLDIPGVNTVINFTLPATLEHYI 408
G+DIP V+ +I++ +P+ +EHY+
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYV 24
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 205 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQ--KREEKER 44
+E E + E TAK + V KD+ QPG + P +D QT Q KRE++ +
Sbjct: 223 DEEDESEDEVAEALTAKKKAVTPKDKKQPGKKETP-AGKDCLQTRNQALKREKESK 277
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 569 GALNQPQRLDSLKRFRE-QQADVLVATDVAARGLDIPGVNTVINFTL 432
G + Q ++ + + +FR + ++++AT VA GLDI + VI + +
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDM 643
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/69 (26%), Positives = 41/69 (59%)
Frame = -1
Query: 250 EKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTP 71
EK +LE E + +EE ++ + E++ + ++ ++K+E + Q E +++R+ +
Sbjct: 166 EKQKRLEEERIRSQNEERKRREREQKEREKQQ-KLDMEKEERRRRQQEEEKKRRE--EEE 222
Query: 70 KQKREEKER 44
K+K+ EKE+
Sbjct: 223 KRKKVEKEK 231
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = -1
Query: 196 AEKQMNKMEKQTAK-LEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERL 41
++KQ+ +++ AK +E + + E + + E ++QR + KQKR E+ER+
Sbjct: 124 SKKQLLAEQRRRAKEMEQIAMELEEKRKEEEEKEKQRKQLEVEKQKRLEEERI 176
>SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = -1
Query: 265 SPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRD 86
SPN ++ L+ E ++ + EYAE+ + E + K+++ +P+R +D
Sbjct: 270 SPNAVGSIVGLQSEEISQMASEYAERDFKSSALSSGNNENLKKQEQQFRAHCKDPKRSQD 329
Query: 85 WFQTPK 68
++PK
Sbjct: 330 PKRSPK 335
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = -3
Query: 458 VNTVINFTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIVKRASKPVKSRQI 279
V+ VINF +P T E Y+H +S + L ++ + +P+ +
Sbjct: 397 VSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLFLQLINKL-QPMGVKL- 454
Query: 278 PPDIVAKXQGETDQTRTGDCRNSRRGIRREADEQDGEAN 162
PD + + D+ R NSR+ R E DE ++N
Sbjct: 455 -PDELTRSAHVLDERRRAS--NSRK--RAEKDEIVNQSN 488
>SB_59279| Best HMM Match : SURF6 (HMM E-Value=3.5)
Length = 218
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1
Query: 214 ILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 44
++DE +EK+ + EK + + +K + Q Q ++Q D QT KQ++E+K++
Sbjct: 163 LVDELKSEKERKRREKNQKRQQQRKEKQKQQKEQQQLHKQQNDQQQT-KQQQEQKQQ 218
>SB_5270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = -1
Query: 214 ILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 44
++DE +EK+ + EK + + +K + Q Q ++Q D QT KQ++E+K++
Sbjct: 546 LVDELKSEKERKRREKNQKRQQQRKEKQKQQKEQQQLHKQQNDQQQT-KQQQEQKQQ 601
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -1
Query: 208 DEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQR-QRDWFQTPKQKREEKERLA 38
+EE KQ + K+ ++E+ +K+E + + E +R +R+ + +Q + EK+RLA
Sbjct: 615 EEERKRKQEEEERKRKMQMELQRRKEEEEQKKRDEEERKRREKEEKDRQFQLEKQRLA 672
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = -1
Query: 286 DKYRPISSPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQH 107
++ R I E+ + E E +EE +++M +ME Q K E KK + + +
Sbjct: 597 ERLRKIQEQMELERKRREEEERKRKQEEEERKRKM-QMELQRRKEEEEQKKRDEEERKRR 655
Query: 106 EPQRQRDWFQTPKQKREEKER 44
E + + FQ KQ+ E+E+
Sbjct: 656 EKEEKDRQFQLEKQRLAEEEQ 676
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 593 GVKAAELHGALNQPQRLDSLKRFREQQADVLVATDVAARGL 471
G+ L+G Q +R+ F ++ VL ATD+AARGL
Sbjct: 299 GIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 569 GALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 438
G Q Q L ++ F++ ++L+AT VA GLDI + VI +
Sbjct: 981 GMSQQEQEL-IIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRY 1023
>SB_815| Best HMM Match : Ribosomal_60s (HMM E-Value=0.14)
Length = 443
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +3
Query: 291 FDRFGRAFDYRFDQIPLALAGERDGHPGATRPGCATHPVYIMF*GGRQREVDD 449
F G D FD + L G G P GC+THP GG Q E+ D
Sbjct: 284 FSNHGMMSDEYFDSL---LEGSAAGLPAVESLGCSTHPAGTAT-GGEQTEIAD 332
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -1
Query: 205 EEYAEKQMNKMEKQTAKLEVVLKKDEAQP-GPQHEPQRQRDWFQTPK-QKREEKER 44
+E ++ ++ E+Q A LE +++E Q Q E +RQ +W + K Q+++E R
Sbjct: 1101 KEEQQRLRDEEEQQRAWLEKKFQREENQQLRQQKEEERQTEWLEQQKLQRKQESTR 1156
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -1
Query: 277 RPISSPNXREKLIKLEPEIVAILDE-----EYAEKQMNKMEKQTAKLEVVLKKDEAQPGP 113
R +S N +E+L + E E+ ++ +E ++AE+ N+M +Q + E L+K E G
Sbjct: 4545 RELSLQNLQEQLKQKEFELSSLKEEVDTTKQFAEQAANQMNEQQQEYEDQLRKMEMLYG- 4603
Query: 112 QHEPQRQRDWFQTPKQKREEKERL 41
E QR D T Q EE E L
Sbjct: 4604 --ELQRSED---TIHQLVEENEHL 4622
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -1
Query: 277 RPISSPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQ-PGPQHEP 101
RP+ + E E+VA ++ E++ +T++L K+ A P P EP
Sbjct: 631 RPLQPGEGGSRGSDTEEEVVAKRRKKVKEEERVTQPDKTSELTESTKRPAADAPPPTPEP 690
Query: 100 QRQRDWFQTPKQKREEKER 44
+ + K+KRE+KER
Sbjct: 691 SLPTE--KKKKEKREKKER 707
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = -1
Query: 208 DEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 44
DEE K+ E++ + E +++E + + E ++QR+ + +++ E K+R
Sbjct: 430 DEEKERKKREAEEEEERRREEEERREEEERKREEEERKQREEEEKKREEEERKQR 484
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 575 LHGALNQPQRLDSLKRFREQQADV--LVATDVAARGLDIPGVNTVINFTLPATLEHYI 408
LH + + L F +Q V L+AT G+D GV VI++ ++E YI
Sbjct: 324 LHSCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYI 381
>SB_53158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 294 DRFGRAFDYRFDQIPLALAGERDGHPGATRPGCATHPVYIMF*GGRQREVDD 449
+R G D F+ + L G+ GHP C+THP GG Q + D
Sbjct: 199 ERHGMMSDEYFESL---LEGDAAGHPAVKSLDCSTHPAGTAT-GGEQTGIAD 246
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 560 NQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYI 408
N+ L+S KR + VLVAT G+D GV+ I+F E +I
Sbjct: 214 NKDAILESFKRL-DGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFI 263
>SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04)
Length = 1223
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -1
Query: 262 PNXREKLIKLEPEIVAILDEEYAE----KQMNKMEKQTAKLEVVLKKDEAQPGPQHE-PQ 98
P R+K +K + ++ +EY + +KM+K+ A E LK+ E + QHE Q
Sbjct: 152 PKFRKKAVKKKKKVPKT-KKEYTPFPPPQPESKMDKELASGEYFLKEKERKAQAQHERKQ 210
Query: 97 RQRDWFQTPKQKREE 53
RQ + K RE+
Sbjct: 211 RQAAAAEKRKVTREQ 225
>SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -1
Query: 247 KLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPK 68
KL KLE + +++ E ++ K EK+ K + D + E QR+RD + K
Sbjct: 166 KLDKLEKQ-----EQDEEETRLLKKEKKKKK-QRERASDSSDDVSDDERQRKRDHKRRRK 219
Query: 67 QKREEKERL 41
++E+KER+
Sbjct: 220 HRKEKKERI 228
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 139 KKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 44
+K+EA P QH + +R P+Q EE+ER
Sbjct: 297 RKEEADPPGQHHEEEERG-VHPPEQHHEEEER 327
>SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09)
Length = 1296
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -3
Query: 569 GALNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEH 414
GA + QR+ ++R R ++ LV +D+AARGL V +++ +P ++H
Sbjct: 195 GANREGQRMRGVER-RARKRFALVLSDIAARGL----VQNILDEDIPDDVKH 241
>SB_12456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = -1
Query: 271 ISSPNXREKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQ 92
+ S E LIK E E +EE E++ + E++ + E +++E + + E + +
Sbjct: 63 VRSEEEDELLIKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 122
Query: 91 RDWFQTPKQKREEKE 47
+ + +++ EE+E
Sbjct: 123 EEEEEEKEEEEEEEE 137
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 38/70 (54%)
Frame = -1
Query: 250 EKLIKLEPEIVAILDEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTP 71
E+ KLE E +++EE K+ + +++ + + +++ AQ + E RQ+ +
Sbjct: 239 EERKKLEEEEANLMEEERKRKEEAEKKREEEERKRREEEEAAQKWKKEELLRQQQ-LERE 297
Query: 70 KQKREEKERL 41
K+++E ERL
Sbjct: 298 KEEQERAERL 307
>SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4)
Length = 176
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = -1
Query: 205 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 44
EE +++ ++EKQ K E +K+E + + + + + + +K+EEKE+
Sbjct: 2 EEKRKEEEKQLEKQR-KAEEEKRKEEQRKAEEEKQKEEAKRIEEENKKKEEKEK 54
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -1
Query: 247 KLIKLEPEIVAILDEEYAEKQMNK--MEKQTAKLEVVLKK-DEAQPGPQHEPQRQRDWFQ 77
K ++P + +++D AE + K E+Q +K + K+ E + + E +RQR +
Sbjct: 3663 KTENIKPVVASVMDFRKAEYERKKREFEEQQSKKRMQQKQLREQKIREREERKRQRMFGN 3722
Query: 76 TPKQKREEKE 47
+PK K E +
Sbjct: 3723 SPKTKTRENQ 3732
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,528,359
Number of Sequences: 59808
Number of extensions: 323176
Number of successful extensions: 1345
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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