Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_K15
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 34 0.027
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 29 0.78
SPBC660.17c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 1.0
SPAC56F8.14c |mug115||sequence orphan|Schizosaccharomyces pombe|... 28 1.8
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 28 1.8
SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr 1... 27 3.1
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 3.1
SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 26 7.2
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.6
SPAC1687.06c |rpl44|rpl28|60S ribosomal protein L28/L44|Schizosa... 25 9.6
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 33.9 bits (74), Expect = 0.027
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 459 LRIIQIVCGFLIFLLPVSIGYCNLSPDSVLFILLCLSTGTCLLYTQV---IQFCQHSLFT 629
L I+ V GF + LLP S +SPDS + L ++ LL T +++ ++ +F
Sbjct: 284 LGIVLFVSGFTLLLLPFSHSSQVVSPDSTILTLFTITLSIALLVTLCFYDVKYARYPVFA 343
Query: 630 IK 635
+K
Sbjct: 344 LK 345
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 29.1 bits (62), Expect = 0.78
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 58 TS*SPLD--SSIFVPIPRPGSPRSGESCDFFLSPPGAIWKPPTGAFPGLSELKNSVLQAK 231
TS +PL S+I PIP + S F +PP A KPPT P E +V+
Sbjct: 690 TSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQAPPIATKKPPTFLKPNSPEYAKTVIPKS 749
Query: 232 SS 237
S+
Sbjct: 750 ST 751
>SPBC660.17c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 172
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 453 RLLRIIQIV-CGFLIFLLPVSIGYCNLSPDSVLFILLCLSTGTCLLYTQVIQFCQHSLF 626
+L+ ++ + C ++++ LP+ +G N + L L+ G L T V+ + QH+ F
Sbjct: 72 KLVELLSLFYCAYVMYFLPLEVGLFNPKTPNKWKFLFILNIGVTALIT-VLGWSQHTSF 129
>SPAC56F8.14c |mug115||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 756 LKESXRIAVGPSAPGGXLPGKRGXWSNAKAGQKDIRTRIYL*W*RENAG 610
LKES + GP+ G G + N K GQ ++ T + L W +E G
Sbjct: 83 LKESFTLTRGPNRRGNVGKGVKRPMVNKKLGQLEL-TSLDLRWQKEGKG 130
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 674 QKPVRKTSEREFIFDGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEK 495
+K +R+ E E + ER+ E+NDL I+ A + +KE+ + +K EK
Sbjct: 700 EKAIRQVQEAEDALE-RERLFREINDLQIQNAEMKEQV-YEKESTISQKEVEITSLRNEK 757
Query: 494 DK 489
D+
Sbjct: 758 DR 759
>SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 386
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 614 LAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEK-DKEPADDLDNA 462
L EL+D+ EE + + E+D+E + P+ EEK DKE AD+L A
Sbjct: 337 LDELDDM--EELTD--EEEEDEEEEAESQSPEPETSEEEKEDKELADELSKA 384
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 67 SPLDSSIFVPIPRPGSPRSGESCDFFLSPP 156
S +DSS FV + RP + SG+ D PP
Sbjct: 100 SGVDSSKFVQLNRPNNVSSGDGSDGSFLPP 129
>SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 456 LLRIIQIVCGFLIFLLPVSIGYCNLSPDSVLFILLCLSTGTCLLYTQVIQFC 611
+L + IVC F ++ + + Y L+IL C+ST + L + C
Sbjct: 33 ILFLNTIVCIFYVYKIALCNEYIRFLAKCFLYILRCMSTVSLLSSAHKMNCC 84
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = -2
Query: 647 REFIFDGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEKDKEPADDLD 468
R+F F ++ D SPSG E E RKI E D D +
Sbjct: 55 RKFAFSRKKEKELTSEDSDAANQSPSGAPESQTEEESDRKIDGTGSSAEGGDGSGTDSIS 114
Query: 467 NAKQS 453
K+S
Sbjct: 115 VIKKS 119
>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 123
Score = 25.4 bits (53), Expect = 9.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 503 EEKDKEPADDLDNAKQSKPWYPRFEECLKTDAAWRDADAAHEIRTD 366
E KDK P + +NAKQS ++ TD + DA +I+ +
Sbjct: 54 ENKDKSPQEMAENAKQSVK--QTAKDAKDTDYQQKAKDAGKKIKEE 97
>SPAC1687.06c |rpl44|rpl28|60S ribosomal protein
L28/L44|Schizosaccharomyces pombe|chr 1|||Manual
Length = 134
Score = 25.4 bits (53), Expect = 9.6
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -2
Query: 767 MQLS*KRAXELLSDRRRLVVXSPERGXXGATQKPVRKTSEREFIFDGEERMLAELNDLGI 588
M +S +++ D R +V PE G ++PV + + F G L +G+
Sbjct: 1 MSVSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSG----LCNDKAVGV 56
Query: 587 EEASPSGKAEKDKEN 543
+ SP G K N
Sbjct: 57 QANSPRGVVLITKTN 71
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,824,331
Number of Sequences: 5004
Number of extensions: 54491
Number of successful extensions: 172
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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