Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_K15
(807 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006) 30 2.5
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_22943| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_40563| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 29 5.9
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 29 5.9
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 29 5.9
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 7.7
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 587 EEASPSGKAEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKP 447
+ ASP G A K+N R + + E +DK P + + ++ KP
Sbjct: 390 DSASPKGNAAPPKKNAARESASSSSSEEEPEDKPPKEKAEKEEEKKP 436
>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 632 DGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEKDKEP---ADDLDNA 462
DGEER E +E+ + G+ ++ K+ + + DG E+KDKE D DN
Sbjct: 780 DGEERKEKENKHGKVEKGNQDGEGKERKDEKDKNG---EDGKGEDKDKEDKKGKDKEDNE 836
Query: 461 KQSK 450
K+ K
Sbjct: 837 KEQK 840
>SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -2
Query: 632 DGEERMLAELNDLGIEEASPSGKAEKDKENRVRR-KIAVPDGDWEEKDKEPADDLDNAKQ 456
D EE E++ E+ E+DKE ++ K + + D E+ DK+ +D+D +
Sbjct: 45 DKEEMDQEEMDKKDKEDMDQEDMEEQDKEEMEQKDKEDMDEQDKEDMDKQDKEDMDKQDK 104
Query: 455 SKPWYPRFEECLKTDAAWRDADAAHEIRTDDR 360
+ EE K D D E+ D+
Sbjct: 105 EEMDKQDKEEMDKQDKEEMDKQDKEEMDKQDK 136
>SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006)
Length = 1103
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = -2
Query: 650 EREFIFDGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEKDKEPADDL 471
ERE I ER+LA + D GIE P+ + N V K +EEK +
Sbjct: 257 ERERILQERERLLARIKDDGIE--LPTSRVSSASVNAVLEKARQKIPQYEEKIRRVKHAK 314
Query: 470 DNAKQ 456
+ KQ
Sbjct: 315 NRRKQ 319
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = -2
Query: 674 QKPVRKTSEREFIFDGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEK 495
+K + E+E + ++R N+ EE +PS K +K K+++ + K A + D EEK
Sbjct: 477 KKEAEEEEEKEPKSEKKKRKRTSDNESEKEETTPS-KLKKSKKDKKKAKEATEEDDGEEK 535
Query: 494 DKE 486
++
Sbjct: 536 KEK 538
>SB_22943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 816
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 698 ERGXXGATQKPVRKTSEREFIFDGEERMLAELNDLGIEEASPSGKAEKDKENR 540
E+G AT K +RKT ++ I ++ + L DLGI + P + K + NR
Sbjct: 46 EKGYDSATLKSIRKTQPKQRI---DKELWLRLKDLGIRK--PFRSSRKSRVNR 93
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.5 bits (63), Expect = 3.4
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = -2
Query: 632 DGEERMLAELNDLGIEEASPSGKAEKDKENRV---RRKIAVPDGDWEEKDKEPADDLDNA 462
D EE + ++ EE K E DKE++ + ++ + D EE DKE +D +
Sbjct: 47 DKEEMDKEDKEEMDQEEMDKEDKEEMDKEDKEEMDQEEMDKEEMDQEEMDKEDKEDKEEM 106
Query: 461 KQSKPWYPRFEECLKTDAAWRDAD--AAHEIRTDDRLHPGQKLD 336
Q + EE K + D + E+ +D+ Q++D
Sbjct: 107 DQEEMDKEDKEEMDKEEMDKEDKEEMGKGEMDKEDKEEMDQEMD 150
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = -2
Query: 728 DRRRLVVXSPERGXXGATQKPV-RKTSEREFIFDGEERMLAEL-NDLGIEEASPSGKAEK 555
+R+R+ + QK + R+ E+E + G ++ L DL ++AS KA +
Sbjct: 538 NRKRVAAGGKLKSVSEEEQKRLEREIREQEELLKGYQQENERLYRDLKQQQAS--SKATE 595
Query: 554 DKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKPWYPRFEECLKTDAA 405
+ +K+ + E+ D++D + WY ++ L DAA
Sbjct: 596 GRMFSENQKLGATSQEREDLKLRYEDEIDRLNRKLKWYAENQQLLDHDAA 645
>SB_40563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 590 IEEASPSGKAEKDKENRVRRKIAVPDGDWEEKDKEPADDL 471
+ E PSG ++ +E R +++ D D EEK++E DD+
Sbjct: 14 LNEPGPSGLQQQQQEGRGKKRSH--DSDDEEKEEEEKDDV 51
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 148 RGRSHSSRLXEETPDEE 98
RG+SH RL EE P+EE
Sbjct: 418 RGKSHEGRLEEERPEEE 434
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 46 LHTFTS*SPLDSSIFVPIPRPGSPRSGE 129
L T S S L SS F P PG+PR+ E
Sbjct: 1304 LQTGPSRSALPSSFFTSTPMPGTPRTSE 1331
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -2
Query: 644 EFIFDGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPDGDWEEKDKEPADDLDN 465
EF+ GE + L I + K+K+ +R V D EK+K A + D
Sbjct: 341 EFVSSGEAERPEKRRALSISSVDDLDREVKEKQELIRCMREVEDAAQREKEKRKAIEADM 400
Query: 464 AK 459
A+
Sbjct: 401 AQ 402
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -2
Query: 710 VXSPERGXXGATQKPVRKTSEREFIFDGEERMLAELNDLGIEEASPSGKAEKDKENRVRR 531
V + + G +K + E E + +E + S GKA+K ++ R ++
Sbjct: 756 VTAKKEDKKGKKKKKEEEEEEEEDQEEEDEDSSGKKKGKKDSSESEKGKAKKQRKGREKK 815
Query: 530 --KIAVPDGDWEEKDKEPADDLDNAKQ 456
+I D + EE+D+E D+ D+ ++
Sbjct: 816 GKEIKKNDDEEEERDEEEDDEEDDDEE 842
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 632 DGEERMLAELNDLGIEEASPSGKAEKDKENRVRRKIAVPD--GDWEEKDKEPADDLDNAK 459
+ ++ ++ +L + G+ K+E K N+ R + + E K+ +L+N+
Sbjct: 77 ENQDELIKQLRE-GLRNPKVKEKSENTKLNKEREILELKGVINQHEINIKQLQQELENSH 135
Query: 458 QSKPWYPRFEECLKTDAAWRDADAAHEIRTDDRLH 354
QS + C + D RD+ A R + LH
Sbjct: 136 QSHEQLHQHYACARGDLDARDSTIARLYREINSLH 170
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,512,129
Number of Sequences: 59808
Number of extensions: 478516
Number of successful extensions: 1739
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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