Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_K12
         (806 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l...    58   3e-07
UniRef50_UPI0001552AE4 Cluster: PREDICTED: hypothetical protein;...    35   2.8  
UniRef50_Q75DK7 Cluster: Serine/threonine-protein kinase STE20; ...    34   3.7  
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing...    34   4.8  
UniRef50_A5DM33 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;...    33   8.5  
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo...    33   8.5  

>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
           latent virus|Rep: Coat protein - Bombyx mori Macula-like
           latent virus
          Length = 237

 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -3

Query: 612 GVRAGVKASVVIRGSISVSHPLVTGHG 532
           GVRAGVKASVVIRGSISVSHPLVTGHG
Sbjct: 211 GVRAGVKASVVIRGSISVSHPLVTGHG 237



 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = -2

Query: 682 PIPYTNHPRLNIHFHQSPDAVLEXGSRRG 596
           PIPYTNHPRLNIHFHQS DAVLE G R G
Sbjct: 188 PIPYTNHPRLNIHFHQSADAVLE-GVRAG 215



 Score = 50.4 bits (115), Expect = 5e-05
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = -1

Query: 752 GXPLMHQATLPCDFGYINPIIKSP 681
           G  LMHQATLPCD GYINPIIKSP
Sbjct: 165 GLALMHQATLPCDLGYINPIIKSP 188


>UniRef50_UPI0001552AE4 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 185

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -1

Query: 695 IIKSPDSIHQPPQT*HPFPSIP*RRTRXGFAPGLKPPLSSEAPSAYLTPSSLGMXKGFRP 516
           ++ +  S+ QPP      P+ P  R R   AP L P  ++ A  A   P +     G RP
Sbjct: 18  VLSNKQSLSQPPPEAAGSPAHP--RPREVLAPALPPQGATPAARALSAPRASAQAPGPRP 75

Query: 515 LIFK 504
           L+FK
Sbjct: 76  LVFK 79


>UniRef50_Q75DK7 Cluster: Serine/threonine-protein kinase STE20;
           n=1; Eremothecium gossypii|Rep: Serine/threonine-protein
           kinase STE20 - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 971

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
 Frame = -1

Query: 707 YINPIIKSPDSIHQPPQT*HPFPSIP*RRTRXGFAP--GLKPPLSSEAPSAYLTPSS--- 543
           Y +P+++SP   H P       PS P  R   G AP      PL+ ++ SA  TP +   
Sbjct: 490 YHSPMLQSPMGFHDPQHDEKFIPSRPAPRPPGGAAPKTDFTSPLAYDSQSATATPKNQRF 549

Query: 542 LGMXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPPTHP 426
                GF  L  K  +N   + L  +      S P T P
Sbjct: 550 SNQSSGFFSLARKATLNKNKQQLPPIPSAAAASAPITQP 588


>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
           protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
           domain-containing protein 13B. - Takifugu rubripes
          Length = 634

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -1

Query: 284 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 171
           PSC F  PP  TVL    R  L++++  LL  +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543


>UniRef50_A5DM33 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 481

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 760 NIGXXPLCIKPPSPAISXTSTRSSNPPIPYTNHP 659
           N+      +KP +PA+  ++T +SN PIP +N P
Sbjct: 162 NLSILGTTLKPKAPAVQTSNTTTSNTPIPVSNTP 195


>UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 135

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 735 SSHPPLRFRXHQPDH-QIPRFHTPTTPDLTSISINPLTPY 619
           S+ P LR +     H  +P++H P  PD +    NP+TPY
Sbjct: 34  SNSPLLRPKARARTHISLPQYHRPPKPDFSLAPDNPVTPY 73


>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
           elongatus|Rep: Tll0286 protein - Synechococcus elongatus
           (Thermosynechococcus elongatus)
          Length = 158

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = -1

Query: 485 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 306
           L  LL+VIP  L   P +H +I  +  A NQ ++  +  + DN   T + +       + 
Sbjct: 8   LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67

Query: 305 TRVYVFDPSCYFSTP 261
            R+  F    +F  P
Sbjct: 68  LRLVGFPEQYHFRHP 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,448,084
Number of Sequences: 1657284
Number of extensions: 15572261
Number of successful extensions: 46603
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46534
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)