Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_K09
         (808 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033821-1|AAH33821.1|  616|Homo sapiens chromosome 16 open read...    33   1.2  
BC032400-1|AAH32400.1|  553|Homo sapiens C16orf44 protein protein.     33   1.2  
DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription fac...    33   1.6  
AK074056-1|BAB84882.1|  296|Homo sapiens FLJ00127 protein protein.     33   1.6  
AK022605-1|BAB14124.1|  616|Homo sapiens protein ( Homo sapiens ...    32   2.1  
AB033111-1|BAA86599.1|  785|Homo sapiens KIAA1285 protein protein.     31   3.7  
AK127846-1|BAC87158.1|  483|Homo sapiens protein ( Homo sapiens ...    30   8.6  

>BC033821-1|AAH33821.1|  616|Homo sapiens chromosome 16 open reading
           frame 44 protein.
          Length = 616

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 582 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVD 680
           R P +TA G  W  M SLG  +Y IGG DD ++
Sbjct: 476 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIE 506


>BC032400-1|AAH32400.1|  553|Homo sapiens C16orf44 protein protein.
          Length = 553

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 582 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVD 680
           R P +TA G  W  M SLG  +Y IGG DD ++
Sbjct: 413 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIE 443


>DQ986374-1|ABJ15760.1|  447|Homo sapiens T-box transcription factor
           TBX20 isoform A protein.
          Length = 447

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 706 PPSPAXSDTSTRSSNPPIPYTNHPRLNIHFHQSPDAVLEGVR 581
           P +P+   +S + S P  P  + PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437


>AK074056-1|BAB84882.1|  296|Homo sapiens FLJ00127 protein protein.
          Length = 296

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 582 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVD 680
           R P +TA G  W  M SLG  +Y IGG DD ++
Sbjct: 156 RRPMTTARG--WHSMSSLGDSIYSIGGSDDNIE 186


>AK022605-1|BAB14124.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12543 fis, clone NT2RM4000590, weakly similar to
           RING CANAL PROTEIN. ).
          Length = 616

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 582 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVD 680
           R P +TA G  W  M SLG  +Y IGG DD ++
Sbjct: 476 RRPMTTARG--WHSMCSLGDGIYSIGGSDDNIE 506


>AB033111-1|BAA86599.1|  785|Homo sapiens KIAA1285 protein protein.
          Length = 785

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -2

Query: 720 PYASSHPPLRXRIHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 550
           P A++   +    H P HQ    H+P  P+   ++++P  P   +  P L+ P+S +
Sbjct: 132 PPAAAEQEVSLLSHSPHHQEAPVHSPEAPEKDPLTLSPTVPE-TDMDPLLQSPVSQK 187


>AK127846-1|BAC87158.1|  483|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45949 fis, clone PLACE7007973. ).
          Length = 483

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 712 IKPPSPAXSDTSTRSSNPPIPYTNHPRLNIHFHQSPDAVLEGVRAGV 572
           + PP P   +T  +   PP P + +  L++H   S      G R+G+
Sbjct: 125 VNPPQPPLPETKEKEQAPPAPSSLYRTLSLHGSASTYTRPSGPRSGI 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,491,197
Number of Sequences: 237096
Number of extensions: 2438081
Number of successful extensions: 10336
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10334
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)