Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_K05
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 151 4e-37
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 111 bits (266), Expect = 7e-25
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = -3
Query: 754 IQLNXGTIEDKVKWAREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPV 575
IQ+N GTIE KV WAREHLE + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 574 RHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 111 bits (266), Expect = 7e-25
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = -3
Query: 754 IQLNXGTIEDKVKWAREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPV 575
IQ+N GTIE KV WAREHLE + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 574 RHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 111 bits (266), Expect = 7e-25
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = -3
Query: 754 IQLNXGTIEDKVKWAREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPV 575
IQ+N GTIE KV WAREHLE + + + + R K + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 574 RHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 145 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = -3
Query: 589 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 674 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 561
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 111 bits (266), Expect = 7e-25
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = -3
Query: 754 IQLNXGTIEDKVKWAREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPV 575
IQ+N GTIE KV WAREHLE + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 574 RHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 111 bits (266), Expect = 7e-25
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = -3
Query: 754 IQLNXGTIEDKVKWAREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPV 575
IQ+N GTIE KV WAREHLE + + + + R K + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 574 RHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 145 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = -3
Query: 589 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2
Query: 674 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 561
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -1
Query: 402 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 223
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 222 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 111 bits (266), Expect = 7e-25
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = -3
Query: 754 IQLNXGTIEDKVKWAREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPV 575
IQ+N GTIE KV WAREHLE + + + + R K + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 574 RHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 437
+ KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 504
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,778,892
Number of Sequences: 27780
Number of extensions: 413893
Number of successful extensions: 1057
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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