Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_K03
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 334  APPPPLRSLISNLSNTCDLTPLPEWSCEQSAWWGA 230
            APP     + +  S+T  + P  +W+ + S WW +
Sbjct: 1013 APPQVTTGVDTGASSTEHMHP--DWTTKPSTWWSS 1045


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 271 LPEWSCEQSAWWGACGR 221
           L +++CE   WW  C R
Sbjct: 50  LKQYTCELKLWWEFCQR 66


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 325 PPLRSLISNLSNTCDLTPLPEWSCE 251
           PP+ S  + L N  D+TP    +C+
Sbjct: 120 PPVTSSSNILQNLADITPNVTPNCD 144


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 325 PPLRSLISNLSNTCDLTPLPEWSCE 251
           PP+ S  + L N  D+TP    +C+
Sbjct: 120 PPVTSSSNILQNLADITPNVTPNCD 144


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 146 SSYPILLQSKGSILQPRPRMEVP 78
           S +P  L S  +I+ P P+ E+P
Sbjct: 237 SPHPPHLSSHPAIVTPGPKQELP 259


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 146 SSYPILLQSKGSILQPRPRMEVP 78
           S +P  L S  +I+ P P+ E+P
Sbjct: 129 SPHPPHLSSHPAIVTPGPKQELP 151


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 325 PPLRSLISNLSNTCDLTPLPEWSCE 251
           PP+ S  + L N  D+TP    +C+
Sbjct: 120 PPVTSSSNILQNLADITPNVTPNCD 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,964
Number of Sequences: 336
Number of extensions: 1199
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)