Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_J14
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 32 0.60
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_58854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 31 0.79
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_34248| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42) 31 1.0
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 30 1.8
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9) 30 2.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 3.2
SB_50335| Best HMM Match : Baculo_11_kDa (HMM E-Value=2.1) 29 4.2
SB_45233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41) 29 5.6
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 28 7.4
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 28 7.4
SB_45259| Best HMM Match : CH (HMM E-Value=0.00071) 28 9.8
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 28 9.8
SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2) 28 9.8
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Frame = +3
Query: 288 TGWAATAEVSPPATCADSQDILP-----PCKLLTATNLTSHHANYNFTGSTSLTRCYSHT 452
T A T +P T A + P P T N + +Y+ S YS +
Sbjct: 32 TNTALTTTTAPTTTTAPTTTTAPTTTTAPTTTTTPNNDYNTSDDYSTNNDYSTNNDYSTS 91
Query: 453 EEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVTTNSDVSIFLP 620
+E + +T + H++ L +H+R +H+R RL + TT + + P
Sbjct: 92 DEYSTNDDYNTKQRLQHQRRLQHQQRLQHQRRLQHQR--RLQHKTTTTAPTTTTAP 145
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = +1
Query: 370 LPQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 549
LP P TTQ T +P TP L T + + T+T T T + P T
Sbjct: 245 LPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTTTQQ 304
Query: 550 PDTNAP 567
P
Sbjct: 305 TTATLP 310
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 372 TATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIA 551
T+ + TS H S TR + + H SS HK + H ++ H + E +
Sbjct: 51 TSRHETSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHE---TS 107
Query: 552 RHERT 566
RHER+
Sbjct: 108 RHERS 112
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 387 TSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 560
TS H S T + + R+H S HK + H K+ H + H R +RHE
Sbjct: 91 TSRHGRSRHKTSRHETSRHERSRHETRQHERSRHKTSRHEKSRHETS--RHER-SRHE 145
>SB_58854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +3
Query: 354 PPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNL-HPPAE 530
PP K T T T +T + HTE A+R + H HR + P E
Sbjct: 7 PPHKTSTQNQHTKTTPQNQHTKTTPQNQ---HTEPAHRTSTQNQHTEPAHRTTTQNQPTE 63
Query: 531 PEHRRIARHERT 566
P HR ++ T
Sbjct: 64 PAHRTTTQNHHT 75
>SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 660
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 441 YSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVTTNSDVSIFLP 620
YS E+ + + + H + R+ LHPP H RI H G + ++V + F P
Sbjct: 359 YSDNEDI-KVLTGNQNPHHVMRQELHPPITARHVRIHPHSWNGSICMRVELIGNSVCFSP 417
Query: 621 HG 626
G
Sbjct: 418 LG 419
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 435 RCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 560
+CY++ R H +S HK LH++ +H EPEH + + E
Sbjct: 485 KCYTYFASFKR-HQASMHKKPLHKEVMH--NEPEHNKPFKQE 523
>SB_34248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 453 EEANREHLSSTHKHALHRKNLHPPAEPEHRRI 548
EE NR+ L+ H L LHPPA+P R +
Sbjct: 56 EEVNRDALTPPSPHPLPVIQLHPPAQPLERSL 87
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 387 TSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERT 566
TS H S TR + + H SS HK + H ++ H + E +RHER+
Sbjct: 16 TSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHE---TSRHERS 72
>SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42)
Length = 495
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 453 EEANREHLSSTHKHALHRKNLHPPAEPEHRRI 548
EE NR+ L+ H L LHPPA+P R +
Sbjct: 347 EEVNRDALTPPSPHPLPVIQLHPPAQPLERSL 378
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 339 SQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLH 518
S + PP L +++ S H + + ++ R H +R LS+ H+ + H + H
Sbjct: 214 SSSLSPPSSLQSSS--PSRHLHCHRPRLSNHHRPSRH-HHCHRPRLSNHHRPSRHL-HCH 269
Query: 519 PPAEPEHRRIARHERTGRLILQV 587
P H R++RH + RL L +
Sbjct: 270 CPRLSNHHRLSRHLHSNRLRLSI 292
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Frame = +1
Query: 328 PVQTHKTFYHHANFLPQQILPATTQTTILRVPPLLHDV----TPTLRKPTANTCQARTST 495
P QT T P P T +T+ + P TPT PT T A T T
Sbjct: 64 PTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPT 123
Query: 496 HFTGKTCIRQRNPNTAASPDTNAP 567
T KT TA +P T P
Sbjct: 124 KPTPKTPTPTTPTPTAHTPTTPTP 147
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = +1
Query: 391 ATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 567
AT QTT P TPT PT T A T T T T T +P T P
Sbjct: 18 ATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTP 76
>SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9)
Length = 229
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 388 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTC 516
P+ + + PP + DV T +PT TC + T T KTC
Sbjct: 141 PSHARRVLSLSPPYMQDVYFTCHRPTCKTCTSPV-TALTCKTC 182
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +1
Query: 355 HHAN--FLPQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTS----THFTGKTC 516
HH LP Q +P + +L L H+ T T PT T A T+ T+ T
Sbjct: 13 HHQRPPLLPSQQIPHHQRPPLLPSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPAT 72
Query: 517 IRQRNPNTAASPDTNAP 567
P T P T P
Sbjct: 73 TTPTKPTTTTPPATTTP 89
>SB_50335| Best HMM Match : Baculo_11_kDa (HMM E-Value=2.1)
Length = 370
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 433 HDVTPTLRKPTANTCQARTSTHFTG--KTCIRQRNP 534
H++TP + P +CQ T G TCIR +NP
Sbjct: 26 HNITPIPKVPIHGSCQRGNGTKPGGAQATCIRVKNP 61
>SB_45233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 324 ATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHAL 500
AT A + + ATN S+HA + T +T+ T+CYS T + T +HAL
Sbjct: 51 ATVATNTKYHSATRSTVATNTKSYHAT-SATMATN-TKCYSATRATVGTNTKCTMRHAL 107
>SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 445 PTLRKPTANTCQARTSTHF-TGKTCIRQRNPNTAASP-DTNAP 567
PTLR P NT +T+TH+ T + ++ R T +P T+ P
Sbjct: 316 PTLRPPVRNTNTRQTTTHWVTRQRTVKVRETTTPHTPRQTSRP 358
>SB_217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 244 PTGPPNDEITPPARTADI 191
PT PP++E TPPA++A +
Sbjct: 435 PTPPPSEEATPPAKSAAV 452
>SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41)
Length = 131
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 486 HKHALHRKNLHPPAEPEHRRIARHERTGRLILQVTTNSDVSIFL 617
H+H H HPP+ P + H+ +I+ + T S +++ L
Sbjct: 10 HRHHQHH---HPPSSPSYHHHRHHQHHPSIIIIIITISTITLVL 50
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 394 TTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNT--AASPDTNAP 567
TT TTI P T KP T + T+T T T + P+T A+S DT++P
Sbjct: 389 TTTTTIAPAPEGTKSNTTVTSKPAWLTQNSNTTT--TTSTIATPKTPDTTAASSADTSSP 446
Query: 568 D 570
+
Sbjct: 447 N 447
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 HLRLPVQTHKTFYHHANFLPQQILPAT--TQTTILRVPPLLHDVTPTLRKPTANTCQART 489
H R H HH ++ + AT T+TTI+ + + T T T T T
Sbjct: 4 HDRHHYHRHHNNIHHHHYATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTT 63
Query: 490 STHFTGKT 513
+T T T
Sbjct: 64 TTTTTTTT 71
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 HLRLPVQTHKTFYHHANFLPQQILPAT--TQTTILRVPPLLHDVTPTLRKPTANTCQART 489
H R H HH ++ + AT T+TTI+ + + T T T T T
Sbjct: 126 HDRHHYHRHHNNIHHHHYATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTT 185
Query: 490 STHFTGKT 513
+T T T
Sbjct: 186 TTTTTTTT 193
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +3
Query: 393 HHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHER 563
HH +++ + + + H + NR H H HR + H P P H R
Sbjct: 172 HHHHHHHPSTIIIILRHRHRQHYNRHRRH--HHHHRHRHHHHHPNHPYSHHYPNHHR 226
>SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)
Length = 1032
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 528 EPEHRRIA-RHERTGRLILQVTTNSDVSIFLPHGKLACFXXFACLLE 665
EP RI RH +GR ++ + SDV + P K+ +CL E
Sbjct: 84 EPSSSRILPRHIPSGRYVINILDKSDVDVEKPDKKMITM-YLSCLYE 129
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 360 CKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHP---PAE 530
C + T+ ++ H +T ++ T H S+TH + +H HP A
Sbjct: 11 CFCIFVTHASTTHPYITHASTTHPHIAHASTTHPYITHASTTHHYIVHASTTHPYITYAS 70
Query: 531 PEHRRIAR 554
H IAR
Sbjct: 71 TTHPHIAR 78
>SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2)
Length = 332
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 387 TSHHANYNFTGSTSLTRCYSHTEEANREHLS--STHKHALHRKN 512
T+ H + G T+L R SH+E N H + S + ALHRKN
Sbjct: 179 TALHDKSHREGQTALHRT-SHSEVQNARHRTCYSKDQDALHRKN 221
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 303 TAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSS 482
++ +PP T ++ +P C+ TAT L S+H++ +T +T S + + H SS
Sbjct: 926 SSTATPPETFHNN---VPSCQSATATPLNSYHSSLVNPTTTPITSYQSSSNVSAGSHHSS 982
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,465,602
Number of Sequences: 59808
Number of extensions: 548766
Number of successful extensions: 1867
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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