Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_J14
         (779 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g42060.1 68416.m04315 myosin heavy chain-related                    31   1.1  
At3g25840.1 68416.m03219 protein kinase family protein contains ...    31   1.1  
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate...    29   2.6  
At2g04620.1 68415.m00470 cation efflux family protein potential ...    29   3.5  
At5g47910.1 68418.m05918 respiratory burst oxidase protein D (Rb...    29   4.6  
At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family...    28   6.0  
At2g33570.1 68415.m04114 expressed protein                             28   6.0  
At1g44890.1 68414.m05143 expressed protein                             28   6.0  
At1g70340.1 68414.m08092 expressed protein                             28   8.0  
At1g60960.1 68414.m06862 metal transporter, putative (IRT3) iden...    28   8.0  
At1g08490.1 68414.m00940 cysteine desulfurase, putative similar ...    28   8.0  

>At3g42060.1 68416.m04315 myosin heavy chain-related
          Length = 712

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 86  EALEHTLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSP 205
           + L+ T  S+  P+   S +R+R  ++  PE G SN+G P
Sbjct: 440 KVLKETTGSVPFPSVGGSRSRKRDSSRRSPETGPSNVGKP 479


>At3g25840.1 68416.m03219 protein kinase family protein contains
           Pfam profile: PF00069 eukaryotic protein kinase domain
          Length = 935

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = +3

Query: 384 LTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHER 563
           + SHH  ++ + S+S       TE+A++ H    HKH  HR   H   + E+   +  + 
Sbjct: 7   IESHHRKHHRSSSSS-----DDTEKASKRHKHRHHKHHHHRHRHHRDKKRENEIPSAGDE 61

Query: 564 TGRLILQVTTNSDVSI 611
           T   IL VT  + + +
Sbjct: 62  TE--ILDVTPAAPIVV 75


>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
           similar to glucan endo-1,3-beta-glucosidase precursor
           SP:P52409 from [Triticum aestivum]
          Length = 330

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +1

Query: 337 THKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTST 495
           T+ T    A F P  I P    TT+  VPP+     PTL  P   T    T T
Sbjct: 39  TNPTTTPTATFPPVTITPTNPATTVPIVPPVTTIPPPTLTPPPVITIPPPTLT 91


>At2g04620.1 68415.m00470 cation efflux family protein potential
           member of the cation diffusion facilitator (CDF) family,
           or cation efflux (CE) family, see PMID:11500563
          Length = 798

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 393 HHANYNFTGSTSLT--RCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERT 566
           HH  +  +G T     + +SH  E + +H S +HKH  H ++       EH     H  +
Sbjct: 545 HHHAHGGSGCTHSHSHQSHSHKNEEHHQH-SDSHKHEEHHQHSDSHKHEEHHEHDHHHHS 603


>At5g47910.1 68418.m05918 respiratory burst oxidase protein D
           (RbohD) / NADPH oxidase identical to respiratory burst
           oxidase protein D from Arabidopsis thaliana [gi:3242789]
          Length = 921

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +3

Query: 225 SFGGPVGRPPXQSRRSARFS 284
           +F GP+GRP   S+++ARF+
Sbjct: 37  AFSGPLGRPKRASKKNARFA 56


>At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 932

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 23/70 (32%), Positives = 32/70 (45%)
 Frame = +3

Query: 216 VISSFGGPVGRPPXQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSH 395
           V SS+  PVG     +R     S+  W    E++   +C DS D + P   L AT +  +
Sbjct: 259 VCSSWFAPVG----SARDYPLLSK--WVIYGELACNGSCPDSSDEISPIYSLWATFIGLY 312

Query: 396 HANYNFTGST 425
            ANY    ST
Sbjct: 313 IANYVVERST 322


>At2g33570.1 68415.m04114 expressed protein
          Length = 496

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 357 PCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSST 485
           PC  +T T  T+  ++ NFT + + T   S T  A  +   ST
Sbjct: 51  PCSAVTTTTTTTLLSSSNFTSAENFTTSLSTTTAAASQKYDST 93


>At1g44890.1 68414.m05143 expressed protein
          Length = 281

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 426 SLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 557
           SL RC S     N +   S++   +H +N     EP H+  + H
Sbjct: 2   SLVRCLSLRSVLNPQRYRSSYSFLIHLQNPREEEEPTHKTRSYH 45


>At1g70340.1 68414.m08092 expressed protein
          Length = 510

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 165 KCSRSAGAPISAVRAGGVISSFGGPV-GRPPXQSRRSARFSRTGWAATAEVSP 320
           K S SA    S +R GGV  SFGG V G+   +S  +A   ++ + ++A   P
Sbjct: 166 KRSVSARFAASPIRRGGVRCSFGGGVLGKLEGESPATAMLRKSCFVSSASKFP 218


>At1g60960.1 68414.m06862 metal transporter, putative (IRT3)
           identical to putative metal transporter IRT3
           [Arabidopsis thaliana] gi|17385796|gb|AAL38438; similar
           to iron-regulated transporter 1 [Lycopersicon
           esculentum] gi|9716481|gb|AAF97509; member of the Zinc
           (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563
          Length = 425

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 453 EEANREHLSSTHKHALHRKNLHPP 524
           E++   H+   H HA H ++ HPP
Sbjct: 204 EDSGGIHIVGIHAHAAHHRHSHPP 227


>At1g08490.1 68414.m00940 cysteine desulfurase, putative similar to
           nitrogen fixation protein (nifS) GB:D64004 GI:1001701
           from [Synechocystis sp]; contains TIGRFAM TIGR01364:
           phosphoserine aminotransferase; contains Pfam PF00266:
           aminotransferase, class V
          Length = 463

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -3

Query: 324 PEVRLPRSRPTQSARTGQIASTVXEAGRRVRQTTRSRLQHGLPILEPPRSGCTCAR-VRR 148
           P+VR+   RP++S   G + S   E        T    QHG+ I    RSG  CA+ + R
Sbjct: 369 PDVRIYGPRPSESVHRGALCSFNVEGLHPTDLATFLDQQHGVAI----RSGHHCAQPLHR 424

Query: 147 LVG 139
            +G
Sbjct: 425 YLG 427


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,661,372
Number of Sequences: 28952
Number of extensions: 358299
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)