Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_J11
         (812 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023D4B7 Cluster: hypothetical protein FG10977.1; ...    33   8.6  

>UniRef50_UPI000023D4B7 Cluster: hypothetical protein FG10977.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10977.1 - Gibberella zeae PH-1
          Length = 632

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 630 EHCHASLPPRHGFXALHRXWTEPXHPHAP 716
           EHC   LPP H F  L R + +  HP  P
Sbjct: 142 EHCLPCLPPEHDFRKLRRLYLDRIHPILP 170


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,777,544
Number of Sequences: 1657284
Number of extensions: 6216393
Number of successful extensions: 14834
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 14515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14829
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)