Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_J09
(815 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 237 2e-61
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 158 1e-37
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 87 4e-16
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 82 2e-14
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 78 2e-13
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 76 1e-12
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 72 2e-11
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 70 6e-11
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 69 2e-10
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 69 2e-10
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 55 2e-06
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 52 2e-05
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 51 3e-05
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 50 7e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 44 0.005
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 41 0.043
UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to endonuclea... 38 0.30
UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to endonuclea... 37 0.53
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 37 0.53
UniRef50_UPI000058732A Cluster: PREDICTED: similar to endonuclea... 37 0.70
UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole geno... 36 1.2
UniRef50_UPI0000E49EC7 Cluster: PREDICTED: similar to endonuclea... 35 2.1
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 35 2.1
UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse tr... 35 2.8
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 35 2.8
UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix p... 35 2.8
UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 35 2.8
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 35 2.8
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 35 2.8
UniRef50_UPI0000E478ED Cluster: PREDICTED: similar to tryptophan... 34 3.7
UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; S... 34 3.7
UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr prote... 34 4.9
UniRef50_Q3LG56 Cluster: ORF2-encoded protein; n=4; Bilateria|Re... 34 4.9
UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 34 4.9
UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A6R672 Cluster: Predicted protein; n=42; Ajellomyces ca... 33 6.5
UniRef50_A6QZP1 Cluster: Predicted protein; n=37; Ajellomyces ca... 33 6.5
UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1 r... 33 8.6
UniRef50_Q4S3S0 Cluster: Chromosome 17 SCAF14747, whole genome s... 33 8.6
UniRef50_Q4EC81 Cluster: Pol protein; n=2; Wolbachia endosymbion... 33 8.6
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 237 bits (581), Expect = 2e-61
Identities = 110/152 (72%), Positives = 128/152 (84%)
Frame = -1
Query: 725 RXRXAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQ 546
R R AFILGRLYPMIC+RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR H+ + Q +Q
Sbjct: 785 RDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQ 844
Query: 545 SRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPD 366
SRFCR+AVGAPWFVRNVDLHDDL LESI K+++S S R+FDKA RH+N LIVAA +Y P+
Sbjct: 845 SRFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDNRLIVAAADYSPN 904
Query: 365 PADRMESSRRRPKHVISDPPDPLTVLLGTSST 270
P S RRRP+HV++DP DP+T+ L T S+
Sbjct: 905 PDHAGASHRRRPRHVLTDPSDPITLALDTFSS 936
Score = 53.6 bits (123), Expect = 6e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -3
Query: 810 PIPXAPKVKYLGVTLDSRMTFRPHIKTV 727
PIP A KVKYLGVTLD+ MTFRPHIKTV
Sbjct: 757 PIPWARKVKYLGVTLDASMTFRPHIKTV 784
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 158 bits (384), Expect = 1e-37
Identities = 68/140 (48%), Positives = 100/140 (71%)
Frame = -1
Query: 707 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRI 528
+LGRL+P++C +SKMSLR+K+ LYKTCIRPV+TY+ VFAH ++ + Q+ Q+R R
Sbjct: 2 VLGRLHPLLCHKSKMSLRHKLILYKTCIRPVITYSCPVFAHMSKDNFHKLQVFQNRVLRK 61
Query: 527 AVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRME 348
G PW++R VDLH +L++ SI Y++S ++ +F+KAA H +PL+V+A NY P P
Sbjct: 62 VTGTPWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAANYQPVP--NAA 119
Query: 347 SSRRRPKHVISDPPDPLTVL 288
RRRP+H+ DPPD +T +
Sbjct: 120 RPRRRPRHIFIDPPDEITAV 139
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 87.4 bits (207), Expect = 4e-16
Identities = 48/140 (34%), Positives = 73/140 (52%)
Frame = -1
Query: 725 RXRXAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQ 546
R R + + Y ++ RSK+SL NK+T+YK + P Y ++ A H+K Q IQ
Sbjct: 766 RTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQ 825
Query: 545 SRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPD 366
++ R+ G WFVRN LH DL L ++ + S R+ D+ RH N L A
Sbjct: 826 NKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SR 883
Query: 365 PADRMESSRRRPKHVISDPP 306
P R+ +RR+P+ +I+ P
Sbjct: 884 PPRRL--NRRQPRDLITRSP 901
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 810 PIPXAPKVKYLGVTLDSRMTFRPHIKTV 727
P+P KYLGV LD R+TF H+ +
Sbjct: 738 PVPQPNAAKYLGVLLDRRLTFSKHVTDI 765
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = -1
Query: 701 GRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA-ARIHLKSFQIIQSRFCRIA 525
G L ++CRRS +S+ NK+ LYK+ IRP MTYASV +A A + + Q Q++F R A
Sbjct: 1246 GMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQA 1305
Query: 524 VGAPWFVRNVDLHDDLDLESISKYLQSAS 438
APWFVRN LH ++ + ++ ++ + +
Sbjct: 1306 FNAPWFVRNNQLHREVKMPTMEEFFRETA 1334
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHI 736
IP + +VKYLGV LD +++F PH+
Sbjct: 1211 IPWSDQVKYLGVILDKKLSFGPHL 1234
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/100 (35%), Positives = 60/100 (60%)
Frame = -1
Query: 695 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 516
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R ++ Q QSR RI GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 515 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 396
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 36.7 bits (81), Expect = 0.70
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTVTRPXRLHFR 700
IP A +V YLGV LD R+T+R HI+ ++ +L R
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKAR 765
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 75.8 bits (178), Expect = 1e-12
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = -1
Query: 704 LGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 525
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA+ HL +I+Q++ R
Sbjct: 778 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 837
Query: 524 VGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RME 348
GAPW++R D+ DL + + LQ+ + ++ ++ H N L G AD R
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTR 897
Query: 347 SSRRRPKHVISDPPD 303
RR +H D P+
Sbjct: 898 VKRRLKRHHPHDLPN 912
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80;
Culicimorpha|Rep: Reverse transcriptase homolog protein -
Chironomus thummi
Length = 883
Score = 72.1 bits (169), Expect = 2e-11
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -1
Query: 704 LGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 525
L +LYP+I R ++ +RNK+ +YK IRP+ TY F A+ HL+ Q++Q++F RI
Sbjct: 781 LRQLYPLISRNLQLDVRNKLLIYKLAIRPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIV 840
Query: 524 VGAPWFVRNVDLHDDLDLESI 462
+ + R DLH + + SI
Sbjct: 841 LNKTRYERITDLHTEAKIPSI 861
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 792 KVKYLGVTLDSRMTFRPHIKTVTRPXRLHFRTSXP 688
+ KYLG+ +D+R+T +PH++ VT R P
Sbjct: 752 EAKYLGMVIDNRVTLKPHVEYVTNRAHTALRQLYP 786
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 70.1 bits (164), Expect = 6e-11
Identities = 31/110 (28%), Positives = 60/110 (54%)
Frame = -1
Query: 704 LGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 525
L L ++CR++ ++L NK LY + +RP+++YAS + AA +L +Q++ R
Sbjct: 368 LKSLNSLLCRKTHLNLANKRLLYLSTLRPILSYASPCWGSAASSNLSHILTVQNKIIRQI 427
Query: 524 VGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNY 375
APWF+RN +L DL + ++ +++ + ++ NP + +Y
Sbjct: 428 SNAPWFIRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSNNPSLTYTIDY 477
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1
- Drosophila melanogaster (Fruit fly)
Length = 884
Score = 68.5 bits (160), Expect = 2e-10
Identities = 27/87 (31%), Positives = 52/87 (59%)
Frame = -1
Query: 707 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRI 528
I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ A+ H+K QI Q++ ++
Sbjct: 797 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
Query: 527 AVGAPWFVRNVDLHDDLDLESISKYLQ 447
+ P++ LH ++ + + +Q
Sbjct: 857 IMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/123 (30%), Positives = 65/123 (52%)
Frame = -1
Query: 764 TVG*HSAPTSRR*RXRXAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 585
T G H T+RR R + +L ++ R+S M+LR K +Y C+ P+ Y ++
Sbjct: 763 TFGPHLKATTRRCYQR----MQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGI 818
Query: 584 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 405
AA+ + Q++Q+R R P++VR LH DL+L ++ + + + R+ D+ RH
Sbjct: 819 AAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHH 878
Query: 404 NPL 396
+ L
Sbjct: 879 SIL 881
Score = 39.9 bits (89), Expect = 0.075
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -3
Query: 792 KVKYLGVTLDSRMTFRPHIKTVTR 721
+ KYLG+TLD R+TF PH+K TR
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTR 773
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -1
Query: 701 GRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA-RIHLKSFQIIQSRFCRIA 525
G L ++CRRS +S+ NK+ LYK+ IRP MTYA V +A A + + Q Q++F R A
Sbjct: 337 GMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYAPVAWAFAPYKTRMHKLQTFQNKFLRQA 396
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHI 736
IP + VKYLGV LD +++F PH+
Sbjct: 302 IPWSDHVKYLGVILDKKLSFGPHL 325
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/113 (29%), Positives = 53/113 (46%)
Frame = -1
Query: 713 AFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFC 534
AFI +L P +S +S + K+ + IR + TYA V+ A HLK + R
Sbjct: 1100 AFI--QLRPFFNNKS-VSYKTKLRAFSAIIRSIQTYAIPVWGAAGESHLKPIEGSFFRML 1156
Query: 533 RIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNY 375
R + PW++RN + ++ + S ++ + + D H NP IVA Y
Sbjct: 1157 RSILDIPWYIRNKQILKEVAITSPNQAAPIFAAKLHDSMKNHCNPTIVATTTY 1209
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -1
Query: 686 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 510
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 509 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 336
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 335 R 333
R
Sbjct: 959 R 959
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = -3
Query: 198 PLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPTK 64
P+ F SRFRS GRFCEA LLLG VLA S LSP P +
Sbjct: 74 PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNR 118
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1
Query: 365 PADRMESSRRRPKHVISDPPDPLTVLLGTSSTGH 264
P D SRR P HV+SDP D L+VLL SSTG+
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -3
Query: 246 SLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRF 139
SL T G +++ R PLSFSPDLLSGSRFR+G +
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase
- Strongylocentrotus purpuratus
Length = 1197
Score = 40.7 bits (91), Expect = 0.043
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = -1
Query: 701 GRLYPMICRRSKMS--LRNKVTLYKTCIRPVMTYASVVFAHAARIH-LKSFQIIQSRFCR 531
GR MICR K S + + V +Y T IRP++ YAS +++ + + + + IQ R CR
Sbjct: 992 GRRIFMICRLRKASVPMHDLVNIYSTYIRPLLEYASPLWSTSITTNQINDIERIQKRICR 1051
Query: 530 IAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAA--GNYIPDPAD 357
I +R+ + + LE++ + S RH L+ ++ +++P
Sbjct: 1052 I------ILRDQYISYEHALETLG--ISRMSERHEQLLLSFAKSLLASSRHRDFLPPLRS 1103
Query: 356 RMESSRRRPKHVISDP 309
+ S R R H + P
Sbjct: 1104 EISSRRLRYSHHLDTP 1119
>UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 293
Score = 37.9 bits (84), Expect = 0.30
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -1
Query: 659 LRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAV 522
LR KV YKT + PV+ YA+VV+ + ++ + IQ R+ R A+
Sbjct: 215 LRTKVLCYKTLVLPVLEYAAVVWDPFTQKNITRLEKIQRRYARFAL 260
>UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 405
Score = 37.1 bits (82), Expect = 0.53
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = -1
Query: 683 ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCR 531
+ + ++ + KV Y T ++P+M YAS+++ + ++K +++Q R+ R
Sbjct: 242 VTTKGQLHPKVKVLCYNTLLQPIMEYASIIWDPHTQANIKKLEMVQRRYVR 292
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 37.1 bits (82), Expect = 0.53
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 650 KVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 516
K+TLYK C+RP + Y S +F++ + +Q RF R +G+
Sbjct: 765 KLTLYKICVRPSLEYCSFIFSNMNTTDKIRVEDVQRRFTRQLLGS 809
>UniRef50_UPI000058732A Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 242
Score = 36.7 bits (81), Expect = 0.70
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -1
Query: 650 KVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCR 531
KV Y T ++P+M YAS+ + + ++K +++Q R+ R
Sbjct: 128 KVLCYNTLLQPIMEYASITWDPRTQANIKKLEVVQRRYVR 167
>UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=8; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 507
Score = 35.9 bits (79), Expect = 1.2
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -1
Query: 620 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 441
P++ VF H RIH + I++ C V PWF N+DL D ++ Y+ S+
Sbjct: 33 PLLGMFPSVFLHLHRIHDRVTDILEKSGCTFLVKGPWFC-NMDLLVTTDPANV-HYIMSS 90
Query: 440 SMRHFDKAA 414
+F K +
Sbjct: 91 HFSNFPKGS 99
>UniRef50_UPI0000E49EC7 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 499
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 671 SKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVG 519
S S KV YK +RPV+ Y V+ + +++ +++Q R+ R +G
Sbjct: 390 SSCSRNIKVLCYKALLRPVLEYGCKVWDPFTKDNIRQLEMVQRRYTRFTIG 440
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTVTR 721
IP K+LG+TLDS+ F PHIK + +
Sbjct: 729 IPVVKTTKFLGLTLDSKFNFLPHIKELKK 757
>UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Nasonia vitripennis
Length = 745
Score = 34.7 bits (76), Expect = 2.8
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTVTR 721
+P + VK LGV +DS+++++PH++ +T+
Sbjct: 388 VPFSNTVKNLGVVMDSKLSWKPHVECITK 416
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHI 736
IP + +VKYLGV LD +++F PH+
Sbjct: 759 IPWSDQVKYLGVILDKKLSFGPHL 782
>UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix
protein 4 (bHLHB4).; n=1; Xenopus tropicalis|Rep: Class
B basic helix-loop-helix protein 4 (bHLHB4). - Xenopus
tropicalis
Length = 195
Score = 34.7 bits (76), Expect = 2.8
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 548 QSRFCRIAVGAPWFVRNVDLHDDLD-LESISKYLQSASMRHFDKAARHENPLIVAAGNYI 372
+ R R+++ A R DL+D LD L S+ Y S S+R K A ++ A NYI
Sbjct: 86 ERRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIAT-----LLLAKNYI 140
Query: 371 PDPADRMESSRRRPKHVISDPP 306
A +E RR ++ PP
Sbjct: 141 LMQAQALEEMRRLVAYLNQGPP 162
>UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 156
Score = 34.7 bits (76), Expect = 2.8
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -1
Query: 494 DLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPA----DRMESSRRRPK 327
+L D D E + S H + A P I+A G Y+ P+ ++E R R
Sbjct: 81 ELTDMSDQELAEVFADSDEEAHSESPAGSYQP-IIARGGYMRSPSWTRCSKVEPPRERKH 139
Query: 326 HVISDPPDPLTVL 288
H SD PDPL L
Sbjct: 140 HSDSDTPDPLMKL 152
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTVTR 721
IP + +K LGVT+D+++TF H+ V R
Sbjct: 1217 IPMSEDIKILGVTVDNKLTFNAHVSNVCR 1245
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 34.7 bits (76), Expect = 2.8
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -1
Query: 644 TLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 513
TL+ + +R ++ Y SVV++ AR H++ + +Q F R++ P
Sbjct: 97 TLFCSLVRSILEYCSVVWSPTARTHVERIERVQRSFTRLSSPIP 140
>UniRef50_UPI0000E478ED Cluster: PREDICTED: similar to tryptophan
2,3-dioxygenase; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tryptophan 2,3-dioxygenase -
Strongylocentrotus purpuratus
Length = 413
Score = 34.3 bits (75), Expect = 3.7
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = -1
Query: 698 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA-ARIHLKSFQIIQSRFCRIA 525
RLY + R+ ++ + V +Y IRPV+ YAS V++ + + +Q R CR+
Sbjct: 39 RLYIVYRLRKCRLPTSDLVAIYAMYIRPVLEYASPVWSSSLTTAQSNDIERVQKRVCRVI 98
Query: 524 VGAP-WFVRNVDLHDDL 477
+ WF + + D +
Sbjct: 99 LAYELWFKQTIHEVDSI 115
>UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YBR225W - Saccharomyces cerevisiae (Baker's yeast)
Length = 900
Score = 34.3 bits (75), Expect = 3.7
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 413 RHENPLIVAAGNYIPDPA---DRMESSRRRPKHVISDPPDPLTVLL 285
+H NP I N I DP +++ P+ VISDP D + +LL
Sbjct: 357 QHSNPTISTTSNKISDPTLYIQQLDIEANSPRPVISDPLDEIDILL 402
>UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr protein;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
Ngfr protein - Monodelphis domestica
Length = 449
Score = 33.9 bits (74), Expect = 4.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +2
Query: 347 FPFCPQDRECSYRRPR*EGSRVV-------PLYRSGAWTPT 448
FP+C Q R C PR +GSR + P SGAW P+
Sbjct: 19 FPYCAQQRTCGLLEPRLQGSRCLENEPSSEPRRASGAWHPS 59
>UniRef50_Q3LG56 Cluster: ORF2-encoded protein; n=4; Bilateria|Rep:
ORF2-encoded protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 1027
Score = 33.9 bits (74), Expect = 4.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 789 VKYLGVTLDSRMTFRPHIKTVTRPXRLHFR 700
+K LGV LDS +TF+ HI VT+ H R
Sbjct: 820 IKDLGVILDSNLTFKNHISHVTKTAFFHLR 849
>UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales
bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales
bacterium SWAT-3
Length = 4022
Score = 33.9 bits (74), Expect = 4.9
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 509 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 330
F + D HD + + + + S+ H D LI A G IP A + +
Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTD---- 1763
Query: 329 KHVISDPPDPLTVLLGTS 276
HVI D PD LT LGT+
Sbjct: 1764 DHVIIDTPDALTAALGTA 1781
>UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1857
Score = 33.5 bits (73), Expect = 6.5
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -1
Query: 509 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 330
F+ ++DL D D++S S+ + N L++AA P DR
Sbjct: 1520 FLNSLDLKQDNDVDS-----SSSRWADINTGEVSGNVLVIAASTSDVTPEDRFNIKNLEV 1574
Query: 329 KHVISDPPDPLTVLLGT 279
+ V ++PP+P V+ GT
Sbjct: 1575 QQVATEPPNPGNVINGT 1591
>UniRef50_A6R672 Cluster: Predicted protein; n=42; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1411
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 810 PIPXAPKVKYLGVTLDSRMTFRPHIKTVTRPXR 712
P P +++LGV D R+T+RPH+ T + R
Sbjct: 873 PAGQEPALRWLGVHFDRRLTWRPHVSTRAKKAR 905
>UniRef50_A6QZP1 Cluster: Predicted protein; n=37; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 709
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 810 PIPXAPKVKYLGVTLDSRMTFRPHIKTVTRPXR 712
P P +++LGV D R+T+RPH+ T + R
Sbjct: 164 PAGQEPALRWLGVHFDRRLTWRPHVSTRAKKAR 196
>UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 492
Score = 33.1 bits (72), Expect = 8.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 810 PIPXAPKVKYLGVTLDSRMTFRPHIK 733
P+ +VKYLGVTLD+++ + HIK
Sbjct: 122 PLKLVKEVKYLGVTLDAKLNWGKHIK 147
>UniRef50_Q4S3S0 Cluster: Chromosome 17 SCAF14747, whole genome
shotgun sequence; n=3; Bilateria|Rep: Chromosome 17
SCAF14747, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 595
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 303 IRRIRDDVFRATSTAFHSVRRIGNVVTGGHDERVLVSCR-FIEVAHGRRLK 452
+R++ +V R T T FH VT G E +L++C+ + ++A+ R +K
Sbjct: 180 VRKMEAEVVRMTCTLFHGGPNSCGTVTSGGTESILMACKAYRDMAYERGIK 230
>UniRef50_Q4EC81 Cluster: Pol protein; n=2; Wolbachia endosymbiont
of Drosophila ananassae|Rep: Pol protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 242
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 813 QPIPXAPKVKYLGVTLDSRMTFRPHIKTVTRPXRLHFR 700
Q IP A K KYLGVTLD ++ HI + H +
Sbjct: 190 QIIPHANKYKYLGVTLDRKINMSLHISLLCMMTYFHLK 227
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,360,306
Number of Sequences: 1657284
Number of extensions: 14620732
Number of successful extensions: 35802
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 34320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35784
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -