Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_J09
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    32   0.018
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    31   0.032
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    30   0.098
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           29   0.13 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    29   0.17 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    28   0.40 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    28   0.40 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    28   0.40 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    28   0.40 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   0.52 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    27   0.91 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    26   1.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.7  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    25   3.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   6.4  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   6.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   6.4  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 32.3 bits (70), Expect = 0.018
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTVT 724
           ++YLGVTL  ++++ PH+K VT
Sbjct: 730 IRYLGVTLQDKLSWLPHVKEVT 751


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 31.5 bits (68), Expect = 0.032
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -3

Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTVT 724
           +P +  +KYLGV + + +++ PH+K +T
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEIT 827


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 29.9 bits (64), Expect = 0.098
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIK 733
           +KYLGV +D R++FR H++
Sbjct: 705 LKYLGVIIDDRLSFRKHVE 723


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTVTRPXR 712
           ++YLGVTL   +++ PH++ VT   R
Sbjct: 797 MRYLGVTLHDHLSWLPHVREVTTRAR 822


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTV 727
           +P +  +KYLGV L   +++ PH+K V
Sbjct: 739 VPFSRTLKYLGVRLHYNLSWVPHVKAV 765


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTV 727
           ++YLGV L   +++RPH++ V
Sbjct: 740 IRYLGVMLHDHLSWRPHVEMV 760


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTV 727
           +KYLG+ +D R+ +  HIK V
Sbjct: 714 LKYLGIMIDDRLEYTQHIKYV 734


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIK 733
           +KYLGV +D R+ F+ H++
Sbjct: 766 LKYLGVVIDDRLKFKSHLE 784


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -3

Query: 807 IPXAPKVKYLGVTLDSRMTFRPHIKTVTR 721
           +P +  +K+LGV +   +++ PH+  VT+
Sbjct: 744 VPYSRSIKHLGVLVHDHLSWIPHVTAVTQ 772


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.5 bits (58), Expect = 0.52
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 674 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 525
           R +  LRN   LY   +RP++ YAS+++           + IQ  F R+A
Sbjct: 812 RDQSFLRN---LYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRVA 858


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 26.6 bits (56), Expect = 0.91
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIK-TVTRPXRL 709
           +KYLG+ LD R+ +  HI+  V R  +L
Sbjct: 709 LKYLGMVLDDRLEYTSHIRYAVERATKL 736


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 7/22 (31%), Positives = 18/22 (81%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTVT 724
           ++YLGV +D++++++ H++  T
Sbjct: 751 IRYLGVVIDNQLSWKSHVEYCT 772


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTVT 724
           ++YLGV +   ++++PH++  T
Sbjct: 737 IRYLGVQIHDHLSWKPHVELST 758


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 786 KYLGVTLDSRMTFRPHIKTV 727
           K LGV LDS + F+ HI  V
Sbjct: 845 KDLGVLLDSSLNFKQHIDDV 864


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 570 VYAGRVSEHYTCIGHDGAYASFVECHLISKGHFTSPAY 683
           V+  +  EH    GHDGA A F        G+FT+ A+
Sbjct: 171 VFVDKFEEHVCPKGHDGALAYF------GYGNFTADAF 202


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHIKTVT 724
           ++YLGV L   + +R H+  V+
Sbjct: 790 IRYLGVQLQDHLKWRDHVTKVS 811


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
 Frame = -3

Query: 267 SPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLSGS--RFRSGGRFCEA---RLLLGFVLA 103
           SP + N  +     +     R+ P+SF  D  SGS   F    R C A   RL +  ++ 
Sbjct: 65  SPVNENIVIRLADGSRPWWERYQPISFKLDTRSGSEAEFADMSRRCNAAGVRLYVDIIIN 124

Query: 102 TSSGLSPV 79
                 PV
Sbjct: 125 HMGATQPV 132


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 789 VKYLGVTLDSRMTFRPHI 736
           ++YLGV +     +RPH+
Sbjct: 734 IRYLGVMIHDHFLWRPHV 751


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,190
Number of Sequences: 2352
Number of extensions: 15273
Number of successful extensions: 48
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)