Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_J06
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 206 2e-53
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.3
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.7
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.7
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.7
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 3.0
L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid desa... 29 5.2
AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical ... 29 5.2
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.9
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 9.1
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 9.1
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 9.1
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 206 bits (502), Expect = 2e-53
Identities = 92/154 (59%), Positives = 118/154 (76%), Gaps = 5/154 (3%)
Frame = -2
Query: 805 VLAARAVVAIENPADVXVISSRPFGQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFRE 626
+LAARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTG T I GRF+PG TNQIQ F+E
Sbjct: 59 LLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKE 118
Query: 625 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 446
PRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+L
Sbjct: 119 PRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWML 178
Query: 445 AREVLRLRGVLPRDQRW-----DVVVDLFFYRXP 359
ARE+L LRG + R + +++ DL+FYR P
Sbjct: 179 AREILILRGKISRQTGFVLEGKEIMPDLYFYRDP 212
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 733 GQRAVLKFAAHTGXTXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 572
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 672 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 520
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 672 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 520
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 672 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 520
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 672 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 520
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
protein ZC412.2 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 277 MDRSNYFWFSWYHSLFPGLLFILFTFFRXHGRRTNQ 384
M ++F FS + GLLFI +F + HG T++
Sbjct: 690 MQMDSFFMFSLIRDISNGLLFIHNSFLKCHGHLTSR 725
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 217 CCTRCSSCFWSTPCSRRMVCP 155
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid
desaturase protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 286 SNYFWFSWYHSLFPGLLFILFTFFR 360
SN+FW+ W F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281
>AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical
protein Y67H2A.8 protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 286 SNYFWFSWYHSLFPGLLFILFTFFR 360
SN+FW+ W F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 538 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 431
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 566 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 459
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 168 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 263
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 487 TKSSHSIGLMWWLLA 443
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 168 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 263
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,443,742
Number of Sequences: 27780
Number of extensions: 363572
Number of successful extensions: 1056
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -