Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_J05
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   3.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 268  PEWSCEQSAWWGA 230
            P+W+ + S WW +
Sbjct: 1033 PDWTTKPSTWWSS 1045


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 265 EWSCEQSAWWGACGR 221
           +++CE   WW  C R
Sbjct: 52  QYTCELKLWWEFCQR 66


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 600 RGASPERHLEHCHASFHL 653
           +  +P   L HCH  FH+
Sbjct: 593 KATNPGYWLFHCHIEFHV 610


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 600 RGASPERHLEHCHASFHL 653
           R  +P   L HCH  FH+
Sbjct: 660 RADNPGYWLFHCHFLFHI 677


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,724
Number of Sequences: 336
Number of extensions: 1197
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)