Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_J04
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6NP10 Cluster: LD13390p; n=7; Eukaryota|Rep: LD13390p ...    66   1e-09
UniRef50_Q9UBR1 Cluster: Beta-ureidopropionase; n=42; root|Rep: ...    54   4e-06
UniRef50_UPI0000DC0724 Cluster: ureidopropionase, beta; n=1; Rat...    48   3e-04

>UniRef50_Q6NP10 Cluster: LD13390p; n=7; Eukaryota|Rep: LD13390p -
           Drosophila melanogaster (Fruit fly)
          Length = 408

 Score = 66.1 bits (154), Expect = 1e-09
 Identities = 45/153 (29%), Positives = 51/153 (33%)
 Frame = -3

Query: 774 HXKXXXPGVGDFXDPXXKXEXNPGHPXFGXKXGXXPXXXCXGGXXVLXWXXFGQXXXXXV 595
           H K   P VGDF +     E N GHP F  + G      C G      W  FG      V
Sbjct: 217 HRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMFGLNGAEIV 276

Query: 594 FXPSTXXPGEXGXE*XWDLEXREAXIXKWXFXXXXXRXG*XXXPKXXNXXXGXXXXKKLG 415
           F PS    G    E  W +E R A I    F     R G    P       G    K+ G
Sbjct: 277 FNPSATI-GRLS-EPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEFG 334

Query: 414 XFXGXX*FXGPXGXXXPXXXXXKXGXXIXAXEL 316
            F G      P G   P     K G  +   +L
Sbjct: 335 PFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDL 367


>UniRef50_Q9UBR1 Cluster: Beta-ureidopropionase; n=42; root|Rep:
           Beta-ureidopropionase - Homo sapiens (Human)
          Length = 384

 Score = 54.0 bits (124), Expect = 4e-06
 Identities = 39/151 (25%), Positives = 48/151 (31%)
 Frame = -3

Query: 768 KXXXPGVGDFXDPXXKXEXNPGHPXFGXKXGXXPXXXCXGGXXVLXWXXFGQXXXXXVFX 589
           K   P VGDF +     E N GHP F  + G      C G    L W  +       +F 
Sbjct: 196 KNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFN 255

Query: 588 PSTXXPGEXGXE*XWDLEXREAXIXKWXFXXXXXRXG*XXXPKXXNXXXGXXXXKKLGXF 409
           PS    G    E  W +E R A I    F     R G    P       G    +  G F
Sbjct: 256 PSATI-GALS-ESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFTSGDGKKAHQDFGYF 313

Query: 408 XGXX*FXGPXGXXXPXXXXXKXGXXIXAXEL 316
            G      P     P     + G  +   +L
Sbjct: 314 YGSSYVAAPDSSRTPGLSRSRDGLLVAKLDL 344


>UniRef50_UPI0000DC0724 Cluster: ureidopropionase, beta; n=1; Rattus
           norvegicus|Rep: ureidopropionase, beta - Rattus
           norvegicus
          Length = 392

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 34/118 (28%), Positives = 38/118 (32%)
 Frame = -3

Query: 717 EXNPGHPXFGXKXGXXPXXXCXGGXXVLXWXXFGQXXXXXVFXPSTXXPGEXGXE*XWDL 538
           E N GHP F  + G      C G    L W  +       +F PS    GE   E  W +
Sbjct: 212 EGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSVNGAEIIFNPSATI-GELS-ESMWPI 269

Query: 537 EXREAXIXKWXFXXXXXRXG*XXXPKXXNXXXGXXXXKKLGXFXGXX*FXGPXGXXXP 364
           E R A I    F     R G    P       G      LG F G      P G   P
Sbjct: 270 EARNAAIANHCFTCALNRVGQEHYPNEFTSGDGKKAHHDLGYFYGSSYVAAPDGRRTP 327


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,366,970
Number of Sequences: 1657284
Number of extensions: 1358048
Number of successful extensions: 387
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)