Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_J04
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...    65   7e-11

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 46/153 (30%), Positives = 50/153 (32%)
 Frame = -3

Query: 774 HXKXXXPGVGDFXDPXXKXEXNPGHPXFGXKXGXXPXXXCXGGXXVLXWXXFGQXXXXXV 595
           H K   P VGDF +     E N GHP F    G      C G    L W  FG      V
Sbjct: 221 HRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIGVNICYGRHHPLNWLAFGLNGAEIV 280

Query: 594 FXPSTXXPGEXGXE*XWDLEXREAXIXKWXFXXXXXRXG*XXXPKXXNXXXGXXXXKKLG 415
           F PS    GE   E  W +E R A I    F     R G    P       G       G
Sbjct: 281 FNPSATV-GELS-EPMWPIEARNAAIANSYFVGSINRVGTEVFPNPFTSGDGKPQHADFG 338

Query: 414 XFXGXX*FXGPXGXXXPXXXXXKXGXXIXAXEL 316
            F G   F  P     P     + G  I   +L
Sbjct: 339 HFYGSSHFSAPDASCTPSLSRYRDGLMISDMDL 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,188,198
Number of Sequences: 37544
Number of extensions: 38807
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)