Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I23
(837 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0515 + 23582105-23583519,23583613-23583741,23583835-235839... 31 0.86
08_02_1085 + 24237804-24238403 31 1.1
06_02_0063 + 11052916-11053106,11054865-11054945,11055314-110553... 30 2.0
02_03_0333 + 17843605-17843661,17843713-17843881,17845606-178457... 30 2.0
12_02_0741 - 22690452-22690528,22690693-22690813,22690871-226909... 29 3.5
09_03_0182 + 13164582-13164860,13164955-13165050 29 3.5
08_02_1087 + 24245535-24246350 29 3.5
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 29 4.6
07_03_0443 + 18275397-18276355,18276394-18276931 29 4.6
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 4.6
09_04_0539 - 18416184-18416830,18417983-18419057 29 6.1
06_03_1472 - 30377744-30378622 29 6.1
04_04_0514 - 25816808-25817318,25817865-25817994,25818083-25818215 29 6.1
03_06_0220 + 32452831-32452944,32453618-32453911,32454416-324545... 29 6.1
12_01_0467 + 3657320-3657992,3658077-3658342 28 8.0
05_07_0033 + 27197654-27198196,27198297-27198359,27198844-271989... 28 8.0
>02_04_0515 +
23582105-23583519,23583613-23583741,23583835-23583970,
23584051-23584139,23584236-23584347,23584427-23584533,
23584630-23584723
Length = 693
Score = 31.5 bits (68), Expect = 0.86
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -1
Query: 417 HRDSSRARRGQASGAQKAKVIQRTRQDSARQVPVAGPNPRRVR-REGNR*S--VGQESSG 247
HRDS R R G SG ++ R+DS R P P+ R RE S G E SG
Sbjct: 40 HRDSERRRDGGRSGGRELSNGYSHRRDSPRPPPRRRPSEGRTEDREPGEVSGGSGSERSG 99
Query: 246 RR 241
R
Sbjct: 100 ER 101
>08_02_1085 + 24237804-24238403
Length = 199
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 428 APLRTATPAAPGE--GKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKS 255
+P + +P+ E GK P PK++ K P GKS++P D E+ +A ++S
Sbjct: 47 SPSKAPSPSKSPEKSGKAPAAAPPKAAAA--KAPSGKSEAPSEAPDAESGAESPEAGEES 104
>06_02_0063 +
11052916-11053106,11054865-11054945,11055314-11055362,
11055468-11055576,11056356-11056408,11056555-11056617,
11057398-11057745
Length = 297
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 350 EHDKTPRGKSQSPGRTRDVSVEKETVKASDKS 255
+ DK + + +PG T D +V ETV AS+KS
Sbjct: 261 QEDKPDQISNVNPGATSDAAVTAETVDASEKS 292
>02_03_0333 +
17843605-17843661,17843713-17843881,17845606-17845723,
17845725-17846358,17846457-17846526,17847680-17847804,
17848146-17848270,17848638-17848730,17849714-17849753
Length = 476
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 386 KPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQVDAAE 237
+PP+ KP S + S DVS+EKE ++A DK + E
Sbjct: 233 QPPIEPKPCPSGLQNVVLDNHQVSTSFLNDVSLEKENIQARDKFETSTLE 282
>12_02_0741 -
22690452-22690528,22690693-22690813,22690871-22690951,
22691048-22691096,22691324-22691409,22691494-22691571,
22691647-22691796,22691884-22691922,22692194-22692283,
22692568-22692630,22692722-22692791,22693109-22693155,
22693268-22693330,22693411-22693461,22693702-22693785,
22693932-22693996,22694322-22694378,22694452-22694569,
22694664-22694714,22694789-22694875,22694956-22695035,
22695962-22696127
Length = 590
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -3
Query: 523 EHVPERGQHAQRVPRQHXGXXXXXXXXALPCTRRSAPRLQPRPARASLRCTESQSHP 353
EHV ER +H V + C S R++P PA + E Q HP
Sbjct: 487 EHVDERHRHRYEVNPSFVAMLENAGLHFVGCDE-SGKRMEPEPASTYEQVVELQDHP 542
>09_03_0182 + 13164582-13164860,13164955-13165050
Length = 124
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -2
Query: 407 PAAPGE--GKPPVHRKPKSSKEHD-KTPRGKSQSP 312
PAAP + GKP H SS EH+ K PR K++ P
Sbjct: 37 PAAPFQRLGKPLKHPVSPSSDEHEKKRPRNKTKRP 71
>08_02_1087 + 24245535-24246350
Length = 271
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -2
Query: 425 PLRTATPA-APGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQV 249
P+ PA +P PV PK+SK + R + +PG D + + K+S K+
Sbjct: 188 PVELFEPAESPAPAPAPVADAPKASKSKKASHRHVADAPGPAGDDAPPADQRKSSKKNDA 247
Query: 248 DA-AEVTQKLEALQV 207
A A + L AL V
Sbjct: 248 AAGASCLRWLAALPV 262
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = -2
Query: 419 RTATPAAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQVDAA 240
+ ATP +P + S K D P GK +P D S KET ++ D
Sbjct: 326 KQATPRKKTFSRPAPKIRKSSRKPSDIDPSGKDSNPTNV-DTSSSKETGPTAEDHPSDNQ 384
Query: 239 EVTQKLE 219
T +E
Sbjct: 385 PATDNVE 391
>07_03_0443 + 18275397-18276355,18276394-18276931
Length = 498
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 413 ATPAAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRT-RDVSVEK 282
AT AA +GK P P EH++ RGK T DV+ K
Sbjct: 311 ATLAAMAQGKNPTLPSPDEHSEHEEIARGKRDGEALTCEDVAKMK 355
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 419 RTATPAAPGEGKPPVHRKPKSSKEHDKTPRGKS---QSPGRTRDVSVEKETVK 270
R+ +PA G PP R P + +E PR +S +SP +T E+ V+
Sbjct: 225 RSRSPARD-RGSPPRRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVR 276
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = -1
Query: 414 RDSSRARRGQASGAQKAKVIQRTRQDSARQVPVAGPNPRRVRREGNR*SVGQESSGRRGG 235
R+ R R A AK I+ R A A P P V E +R SV
Sbjct: 189 RERDRPRSRAPGAAAHAKGIRTARTRGAHGARAATPTPSIVEPENSRSSVESNLRSSAAA 248
Query: 234 HAETGGA 214
HA A
Sbjct: 249 HARQSSA 255
>06_03_1472 - 30377744-30378622
Length = 292
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 281 PSRRTRRGFGPATGTCRAESC 343
PSR T RGF ATG+ RA C
Sbjct: 95 PSRTTERGFWKATGSDRAIRC 115
>04_04_0514 - 25816808-25817318,25817865-25817994,25818083-25818215
Length = 257
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -2
Query: 434 LHAPLRTATPAAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKAS 264
L AP + AA G K H+KPKS+K+ SP R+ SV + ++ +S
Sbjct: 116 LDAPAQGGHVAASGGKK---HKKPKSAKKPAAAAAAPPASPERSASSSVTESSMASS 169
>03_06_0220 +
32452831-32452944,32453618-32453911,32454416-32454503,
32454596-32454717,32454985-32455142,32455201-32455273,
32455552-32455640,32455753-32455858,32455967-32456179,
32456726-32456920,32457051-32457128,32457209-32457523
Length = 614
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -2
Query: 362 KSSKEHDKTPRGKSQSPGR--TRDVSVEKETVKASDKSQVDAAEVTQ 228
K S+ P G++ S G+ DV EKET K +D+++ + E T+
Sbjct: 73 KVSQSKSSGPNGENGSTGQHDEMDVDAEKETNKVADETEDLSTEATK 119
>12_01_0467 + 3657320-3657992,3658077-3658342
Length = 312
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 PRQSKQNRRWNRSLKRNLTRNKPSQASL 32
P Q+KQNRR +K+ R K +QA L
Sbjct: 223 PEQAKQNRRARNKIKKASRRAKQTQAHL 250
>05_07_0033 +
27197654-27198196,27198297-27198359,27198844-27198993,
27199079-27199150
Length = 275
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 404 AAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQVDAA 240
+AP PP S ++ +T G + P R ++ + A D S+ +AA
Sbjct: 60 SAPASASPPKQPHTPSPEKGQETSAGGASRPSRPWNLRTRRSATVAPDASRSEAA 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,343,760
Number of Sequences: 37544
Number of extensions: 211765
Number of successful extensions: 1145
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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