Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I23
(837 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 39 0.006
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 32 0.66
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 32 0.66
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 0.88
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 31 1.5
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 30 2.0
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_29938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7) 29 6.2
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_56594| Best HMM Match : DUF11 (HMM E-Value=1.2) 28 8.2
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_10576| Best HMM Match : La (HMM E-Value=6.9e-28) 28 8.2
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 440 SXLHAPLRTATPAAPGEGKPPVH--RKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKA 267
S H+P R+ +PA P G PV+ R+ +KE + P+ + S S KE KA
Sbjct: 397 SGAHSPARSLSPAPPSRGYSPVNVIRRQHDNKETKERPKSEQYSSFAAAAASENKENAKA 456
Query: 266 SDKSQVD 246
++ + D
Sbjct: 457 AELNYKD 463
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -2
Query: 389 GKPPV--HRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKE 279
G+PP+ +R P K ++ RG ++P RTRD V++E
Sbjct: 142 GRPPLSHNRHPSDKKTARESSRGTLRTPARTRDQHVDRE 180
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 377 VHRKPKSSKEHD--KTPRGKSQSPGRTRDVSVEKE-TVKASDKSQVDAAEVTQKL 222
+ +K S KE TPR SQSP R+ ++K +++A +SQ E+ QK+
Sbjct: 383 LEKKRASEKERSPGSTPRSDSQSPSRSSSDQIDKHLSLEAQRRSQERIQELQQKV 437
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -2
Query: 392 EGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQVDAAEVTQKL 222
EG PK K+ + P+ +S +KET K S KS + VT K+
Sbjct: 57 EGDEEADEPPKKKKKAESKPKSAEKSKSSKSKTPAKKETKKESKKSPKKSKPVTVKI 113
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 425 PLRTATPAAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVK-ASDKSQV 249
P +TP+ P V KP ++ R S GR + + + ++VK +S K+
Sbjct: 1728 PASKSTPSGPASNNGTVAAKPSQARPLASAKRPASAQAGRPANGAAKPDSVKPSSAKTTT 1787
Query: 248 DAAEVTQKL 222
A T+KL
Sbjct: 1788 RPASTTKKL 1796
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -2
Query: 425 PLRTATPAAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQ 252
P + A P +P +K K+SK P+G+ + R R S + +T+K+ D+ +
Sbjct: 485 PDQQAARKRPARTRPASGQK-KTSKAKTSKPQGQDKQAARPRQASRKTKTIKSQDQDK 541
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 425 PLRTATPAAPGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVK-ASDKSQV 249
P +TP+ P V KP ++ R S GR + + + +++K +S K+
Sbjct: 586 PASKSTPSGPASNNGTVAAKPSQARPLASAKRPASAQAGRPANGAAKPDSLKPSSAKTTT 645
Query: 248 DAAEVTQKL 222
A T+KL
Sbjct: 646 RPASTTKKL 654
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 419 RTATPAAPGEGKP--PVHRKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQVD 246
R A AP KP P H +P SKE + + K + + +K DK V+
Sbjct: 175 RRAGKGAPPSNKPSRPAHGRPGHSKERKEGEKDKGRKSDEKSEDGEKKFDPSGCDKDLVE 234
Query: 245 AAE 237
A E
Sbjct: 235 ALE 237
>SB_29938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 368 KPKSSKEHDKTPRGKSQSPGRTRDVSVEKE-TVKASDKSQVD 246
K ++S+E KTP G +P D S+E E K++ K VD
Sbjct: 659 KEENSEESTKTPEGCDSAPSGAVDKSIEPEYENKSAPKDTVD 700
>SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7)
Length = 192
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 371 RKPKSSKEHDKTPRGKSQSPGRTRDVSVEKETVKASDKSQVDA 243
R+ KS K++DK+P + R + + E K+ K+ +DA
Sbjct: 140 RQAKSKKKNDKSPSKNNNQTNRNQGNTGITENTKSPKKTNIDA 182
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 422 LRTATPAA-PGEGKPPVHRKPKSSKEHDKTPRGKSQSPGRTRD 297
L+ ATP P + + P H KP S TPRG+S SP D
Sbjct: 607 LKNATPTGVPQDRQAPRHSKPLS------TPRGESSSPNTIPD 643
>SB_56594| Best HMM Match : DUF11 (HMM E-Value=1.2)
Length = 375
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 108 CRGSVRRGPLRRGTLRQGALRRGAL*WGAVPVVDLKR 218
CR R P R +R RR A W +P+V +KR
Sbjct: 99 CRSGGLRCPSRSHAMRSMRTRRRARYWDRLPIVGVKR 135
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = -2
Query: 371 RKPKSSKEHDKTPRGKSQSPGRT----RDVSVEKETVKASDKSQVDAAEVTQK 225
R+ + K D+T R S+SP R+ R+++ E+E V + +V E +K
Sbjct: 436 RRDRKEKTRDRTSRSPSESPKRSSRSIRNIASEEEYVILAQMQRVSDTEQEKK 488
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -1
Query: 414 RDSSRARRGQASGAQKAKVIQRTRQDSARQVPVAGPNPRRVRREGNR*SVGQESSGRRGG 235
R R R A GA + + + ++SA GP+ +R G G+ S +RGG
Sbjct: 1096 RGRGRGGRKSARGASRKRGSRARAEESAADTG-EGPSSPAIRGRGRGKGRGEVGSKQRGG 1154
Query: 234 HAETGGAS 211
+G S
Sbjct: 1155 LGRSGDKS 1162
>SB_10576| Best HMM Match : La (HMM E-Value=6.9e-28)
Length = 711
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -2
Query: 419 RTATPAAPGEG-KPPVHRKPKSSKEHDKTPRGKSQSPGRT---RDVSVEKETV 273
+ A P A G+ K + ++ K+SKE TP+ KS P + ++V +K T+
Sbjct: 198 KPAVPKAEGQDTKADLSKEEKNSKEQTPTPKIKSPEPPKEDEWKEVKRKKATI 250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,286,176
Number of Sequences: 59808
Number of extensions: 212369
Number of successful extensions: 1076
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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