Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_I18
         (801 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   270   1e-72
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   270   1e-72
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   270   1e-72
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   270   1e-72
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   270   1e-72
BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p pro...    31   1.4  
AE013599-750|AAF59016.1| 1428|Drosophila melanogaster CG13745-PA...    31   1.4  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  270 bits (662), Expect = 1e-72
 Identities = 129/172 (75%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = -2

Query: 782 VKQRQKXLTLXNPT*RC-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 606
           +KQRQK   +        +IEDKVKWAREHLEKPI V +VF QDEMIDC+          
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 241

Query: 605 XTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 426
            TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 242 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 301

Query: 425 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 270
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G   G+ K
Sbjct: 302 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 353



 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = -3

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           KGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 345 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 404

Query: 115 KDRIREE 95
           KDR++EE
Sbjct: 405 KDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  270 bits (662), Expect = 1e-72
 Identities = 129/172 (75%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = -2

Query: 782 VKQRQKXLTLXNPT*RC-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 606
           +KQRQK   +        +IEDKVKWAREHLEKPI V +VF QDEMIDC+          
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230

Query: 605 XTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 426
            TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290

Query: 425 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 270
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G   G+ K
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 342



 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = -3

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           KGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393

Query: 115 KDRIREE 95
           KDR++EE
Sbjct: 394 KDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  270 bits (662), Expect = 1e-72
 Identities = 129/172 (75%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = -2

Query: 782 VKQRQKXLTLXNPT*RC-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 606
           +KQRQK   +        +IEDKVKWAREHLEKPI V +VF QDEMIDC+          
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217

Query: 605 XTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 426
            TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 218 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277

Query: 425 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 270
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G   G+ K
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 329



 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = -3

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           KGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 380

Query: 115 KDRIREE 95
           KDR++EE
Sbjct: 381 KDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  270 bits (662), Expect = 1e-72
 Identities = 129/172 (75%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = -2

Query: 782 VKQRQKXLTLXNPT*RC-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 606
           +KQRQK   +        +IEDKVKWAREHLEKPI V +VF QDEMIDC+          
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217

Query: 605 XTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 426
            TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 218 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277

Query: 425 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 270
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G   G+ K
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 329



 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = -3

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           KGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 380

Query: 115 KDRIREE 95
           KDR++EE
Sbjct: 381 KDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  270 bits (662), Expect = 1e-72
 Identities = 129/172 (75%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = -2

Query: 782 VKQRQKXLTLXNPT*RC-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 606
           +KQRQK   +        +IEDKVKWAREHLEKPI V +VF QDEMIDC+          
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230

Query: 605 XTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 426
            TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG G
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290

Query: 425 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHGT*K 270
           IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G   G+ K
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 342



 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = -3

Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
           KGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393

Query: 115 KDRIREE 95
           KDR++EE
Sbjct: 394 KDRLKEE 400


>BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p
           protein.
          Length = 1431

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 799 HTQMKLLNSDKRXSHYXIQLNGVPSRTK*NGPENIW 692
           H Q+K    +   S   + LNGVP +T    P+NIW
Sbjct: 786 HKQLKQTAKNNSTSTCNLTLNGVPVKTMCTQPDNIW 821


>AE013599-750|AAF59016.1| 1428|Drosophila melanogaster CG13745-PA
           protein.
          Length = 1428

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 799 HTQMKLLNSDKRXSHYXIQLNGVPSRTK*NGPENIW 692
           H Q+K    +   S   + LNGVP +T    P+NIW
Sbjct: 724 HKQLKQTAKNNSTSTCNLTLNGVPVKTMCTQPDNIW 759


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,950,091
Number of Sequences: 53049
Number of extensions: 773494
Number of successful extensions: 2264
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2264
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)