Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I18
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 221 6e-58
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 221 6e-58
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 221 6e-58
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 221 6e-58
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 221 6e-58
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 221 6e-58
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 180 1e-45
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 180 1e-45
U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.96
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.9
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.1
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 5.1
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 221 bits (539), Expect = 6e-58
Identities = 103/151 (68%), Positives = 119/151 (78%)
Frame = -2
Query: 731 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGL 552
TIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGL
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 551 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 372
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFD 305
Query: 371 LSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
L++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 221 bits (539), Expect = 6e-58
Identities = 103/151 (68%), Positives = 119/151 (78%)
Frame = -2
Query: 731 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGL 552
TIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGL
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 551 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 372
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFD 305
Query: 371 LSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
L++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 221 bits (539), Expect = 6e-58
Identities = 103/151 (68%), Positives = 119/151 (78%)
Frame = -2
Query: 731 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGL 552
TIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGL
Sbjct: 91 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 150
Query: 551 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 372
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+D
Sbjct: 151 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFD 207
Query: 371 LSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
L++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 208 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 115 KDRIRE 98
+D + E
Sbjct: 293 RDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 221 bits (539), Expect = 6e-58
Identities = 103/151 (68%), Positives = 119/151 (78%)
Frame = -2
Query: 731 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGL 552
TIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGL
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 551 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 372
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFD 305
Query: 371 LSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
L++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 221 bits (539), Expect = 6e-58
Identities = 103/151 (68%), Positives = 119/151 (78%)
Frame = -2
Query: 731 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGL 552
TIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGL
Sbjct: 91 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 150
Query: 551 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 372
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+D
Sbjct: 151 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFD 207
Query: 371 LSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
L++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 208 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 115 KDRIRE 98
+D + E
Sbjct: 293 RDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 221 bits (539), Expect = 6e-58
Identities = 103/151 (68%), Positives = 119/151 (78%)
Frame = -2
Query: 731 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGL 552
TIE KV WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGL
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGL 248
Query: 551 RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYD 372
RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+D
Sbjct: 249 RKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFD 305
Query: 371 LSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
L++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 306 LTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 115 KDRIRE 98
+D + E
Sbjct: 391 RDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 180 bits (437), Expect = 1e-45
Identities = 84/130 (64%), Positives = 99/130 (76%)
Frame = -2
Query: 668 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 489
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 488 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 309
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 308 FVMXQGLLHG 279
++M +G + G
Sbjct: 279 YIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 115 KDRIRE 98
+D + E
Sbjct: 343 RDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 180 bits (437), Expect = 1e-45
Identities = 84/130 (64%), Positives = 99/130 (76%)
Frame = -2
Query: 668 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 489
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 488 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 309
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 308 FVMXQGLLHG 279
++M +G + G
Sbjct: 279 YIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -3
Query: 295 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 116
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 115 KDRIRE 98
+D + E
Sbjct: 343 RDFLAE 348
>U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical
protein T20H4.2 protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.96
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 697 CSLAHFTLSSMVHR*VGXHNVSXFCRCLTASFE 795
C H+TL ++H + HN++ C SFE
Sbjct: 138 CGCNHYTLKGLIHHEMNDHNLNAKCHLCQKSFE 170
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 210 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 332
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 158 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCLLHH 328
++T LG G+ +EF +D F C +RLSK++ LFR + + C H
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 596 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 435
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,536,497
Number of Sequences: 27780
Number of extensions: 401175
Number of successful extensions: 1075
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -